1M90 Summary
- Structure title
- Co-crystal structure of CCA-Phe-caproic acid-biotin and sparsomycin bound to the 50S ribosomal subunit
- Authors
- Hansen, J.L., Schmeing, T.M., Moore, P.B., Steitz, T.A.
- Release date
- 2002-09-06
- Experimental technique
- X-RAY DIFFRACTION
- Resolution
- 2.8 Å
- Chains
- 3 RNA chains from , Haloarcula marismortui
- 28 other chains
- Nucleic acid compounds
- Other compounds
- CCA, 23S RRNA, 5S RRNA
- RIBOSOMAL PROTEIN L37Ae, RIBOSOMAL PROTEIN L37E, RIBOSOMAL PROTEIN L39E, RIBOSOMAL PROTEIN L44E, RIBOSOMAL PROTEIN L2, RIBOSOMAL PROTEIN L3, RIBOSOMAL PROTEIN L4, RIBOSOMAL PROTEIN L5, RIBOSOMAL PROTEIN L6, RIBOSOMAL PROTEIN L7AE, RIBOSOMAL PROTEIN L10, RIBOSOMAL PROTEIN L10E, RIBOSOMAL PROTEIN L13, RIBOSOMAL PROTEIN L14, RIBOSOMAL PROTEIN L15, RIBOSOMAL PROTEIN L15E, RIBOSOMAL PROTEIN L18, RIBOSOMAL PROTEIN L18E, RIBOSOMAL PROTEIN L19E, RIBOSOMAL PROTEIN L21E, RIBOSOMAL PROTEIN L22, RIBOSOMAL PROTEIN L23, RIBOSOMAL PROTEIN L24, RIBOSOMAL PROTEIN L24E, RIBOSOMAL PROTEIN L29, RIBOSOMAL PROTEIN L30, RIBOSOMAL PROTEIN L31E, RIBOSOMAL PROTEIN L32E
Pairwise Interactions
Interactions annotated by FR3D:- 1,268 base-pairs
- 3,042 base-stacking
- 191 base-phosphate
- 190 base-ribose
RNA 3D Motifs
In the current release of the RNA 3D Motif Atlas, 1M90 contains:- 75 hairpin loops from 0 motif groups
- 109 internal loops from 0 motif groups
- 40 junction loops from 0 motif groups
3D Redundancy
1M90 has chains which belong to the following equivalence classes in the current representative set:- NR_all_26150.5 (1)
- NR_all_25303.5 (1)
- NR_all_95119.5 (1)
- NR_4.0_26150.5 (1)
- NR_4.0_25303.5 (1)
- NR_4.0_95119.5 (1)
- NR_3.5_26150.5 (1)
- NR_3.5_25303.5 (1)
- NR_3.5_95119.5 (1)
- NR_3.0_26150.5 (1)
- NR_3.0_25303.5 (1)
- NR_3.0_95119.5 (1)
- NR_20.0_26150.5 (1)
- NR_20.0_25303.5 (1)
- NR_20.0_95119.5 (1)
Similar structures
9J1M 9GUL 7PWO 4YZV 4YZV 8IP8 8ZTV 6S0K 1VY7 3CD6 4LNT 5GAE 8ZTU 4ZSN 3CMA 4LNT 4L47 1VY7 4L47 9I1W 5GAG 1KQS 5GAD 7Y38 1VVJ 5GAH 1VVJ 4TUA 4TUD 5LYB 4LFZ 4TUE 3J7Z 4LT8 4LT8 4TUB 4P70 4TUA 6N9E 4TUB 5LYB 4TUD 4TUC 4TUE 4TUC 4LFZ 4P70 4L71 4L71 4V19 4LSK 4LEL 6N9E 3CMA 5GAF 4LSK 4LEL 5O60 7PWG 5NCO 4V19 8OIT 8OIR 5LZE 5LZD 5LZC 5LZB 4ZSN 3J5L 8OIQ 8OIN 1VQO 1QVG 3CXC 1Q7Y 1QVG 1QVG 1Q86 3CME 1Q86 3CME 6OTR 6OTR 6OXI 8FOM 8FOM 8FON 8FON 6NDK 6OXA 6OXA 6NDK 6OXIStructures from NR_all_95119.5