3BNQ Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
No loops found
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_3BNQ_001 | 1/A/5:7, 1/B/19:21 | Isolated non-canonical cWW pair | geometric IL_5TBW_115 NA | |
| IL_3BNQ_002 | 1/A/7:10, 1/B/15:19 | Minor groove platform related | geometric IL_3BNR_008 IL_64231.5 | |
| IL_3BNQ_005 | 1/A/15:19, 1/B/7:10 | No text annotation | geometric IL_3BNR_011 IL_68574.4 | |
| IL_3BNQ_006 | 1/A/19:21, 1/B/5:7 | Isolated non-canonical cWW pair | geometric IL_3BNN_005 IL_28037.2 | |
| IL_3BNQ_007 | 1/C/5:7, 1/D/17:19 | Isolated non-canonical cWW pair | geometric IL_3BNR_007 IL_28037.2 | |
| IL_3BNQ_008 | 1/C/7:10, 1/D/13:17 | Minor groove platform related | geometric IL_3BNR_008 IL_64231.5 | |
| IL_3BNQ_011 | 1/C/15:19, 1/D/5:8 | No text annotation | geometric IL_3BNR_011 IL_68574.4 | |
| IL_3BNQ_012 | 1/C/19:21, 1/D/3:5 | Isolated non-canonical cWW pair | geometric IL_3BNR_012 IL_28037.2 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_3BNQ_003 | Isolated non-canonical cWW pair | ||
| IL_3BNQ_004 | Isolated non-canonical cWW pair | ||
| IL_3BNQ_009 | Isolated non-canonical cWW pair | ||
| IL_3BNQ_010 | Isolated non-canonical cWW pair |
Valid loops
No loops found
Problematic loops
No problematic loops
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