3CCV Summary
- Structure title
- Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation G2616A
- Authors
- Blaha, G., Gurel, G.
- Release date
- 2008-05-20
- Experimental technique
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
- Chains
- 2 RNA chains from Haloarcula marismortui
- 29 other chains
- Nucleic acid compounds
- Other compounds
- 23S RIBOSOMAL RNA, 5S RIBOSOMAL RNA
- 50S ribosomal protein L37e, 50S ribosomal protein L39e, 50S ribosomal protein L44E, 50S ribosomal protein L2P, 50S ribosomal protein L3P, 50S ribosomal protein L4P, 50S ribosomal protein L5P, 50S ribosomal protein L6P, 50S ribosomal protein L7Ae, 50S ribosomal protein L10E, 50S ribosomal protein L10e, 50S ribosomal protein L11P, 50S ribosomal protein L13P, 50S ribosomal protein L14P, 50S ribosomal protein L15P, 50S ribosomal protein L15e, 50S ribosomal protein L18P, 50S ribosomal protein L18e, 50S ribosomal protein L19e, 50S ribosomal protein L21e, 50S ribosomal protein L22P, 50S ribosomal protein L23P, 50S ribosomal protein L24P, 50S ribosomal protein L24e, 50S ribosomal protein L29P, 50S ribosomal protein L30P, 50S ribosomal protein L31e, 50S ribosomal protein L32e, 50S ribosomal protein L37Ae
Pairwise Interactions
Interactions annotated by FR3D:- 1,267 base-pairs
- 3,043 base-stacking
- 78 base-phosphate
- 91 base-ribose
RNA 3D Motifs
In the current release of the RNA 3D Motif Atlas, 3CCV contains:- 74 hairpin loops from 0 motif groups
- 110 internal loops from 0 motif groups
- 40 junction loops from 0 motif groups
3D Redundancy
3CCV has chains which belong to the following equivalence classes in the current representative set:- NR_all_26150.5 (1)
- NR_all_25303.5 (1)
- NR_4.0_26150.5 (1)
- NR_4.0_25303.5 (1)
- NR_3.5_26150.5 (1)
- NR_3.5_25303.5 (1)
- NR_3.0_26150.5 (1)
- NR_3.0_25303.5 (1)
- NR_20.0_26150.5 (1)
- NR_20.0_25303.5 (1)
Similar structures
4V9F 1S72 1YI2 1JJ2 3CCU 1YIJ 1YHQ 3CCL 3G6E 3CMA 3CD6 1YJW 3G71 3CCM 2QEX 1YJN 3CC2 1YIT 3I56 3CC4 2OTL 1YJ9 1KQS 3CCQ 3CCS 3CC7 2OTJ 3CCR 3G4S 3I55 2QA4 3CCJ 3OW2 3CCE 1VQO 1VQ8 1VQM 1VQP 1VQK 1VQL 1VQN 1VQ9 1VQ7 1VQ4 1VQ6 3CPW 1M90 3CME 1VQ5 3CXC 1QVG 1NJI 1KC8 1K73 1Q82 1Q81 1QVF 1K9M 1KD1 1K8A 1Q86 1M1K 1Q7Y 1FFK 1FG0 1FFZ 1N8R 1W2BStructures from NR_all_26150.5