3J7A Summary
- Structure title
- Cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to the anti-protozoan drug emetine, small subunit
- Authors
- Wong, W., Bai, X.C., Brown, A., Fernandez, I.S., Hanssen, E., Condron, M., Tan, Y.H., Baum, J., Scheres, S.H.W.
- Release date
- 2014-07-16
- Experimental technique
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
- Chains
- 2 RNA chains from Plasmodium falciparum
- 31 other chains
- Nucleic acid compounds
- Other compounds
- tRNA, 18S ribosomal RNA
- 40S ribosomal protein eS24, 40S ribosomal protein eS25, 40S ribosomal protein eS26, 40S ribosomal protein eS27, 40S ribosomal protein eS28, 40S ribosomal protein eS30, 40S ribosomal protein eS1, 40S ribosomal protein uS2, 40S ribosomal protein uS3, 40S ribosomal protein uS4, 40S ribosomal protein eS4, 40S ribosomal protein uS5, 40S ribosomal protein eS6, 40S ribosomal protein uS7, 40S ribosomal protein eS7, 40S ribosomal protein uS8, 40S ribosomal protein eS8, 40S ribosomal protein uS9, 40S ribosomal protein uS10, 40S ribosomal protein eS10, 40S ribosomal protein uS11, 40S ribosomal protein uS12, 40S ribosomal protein eS12, 40S ribosomal protein uS13, 40S ribosomal protein uS14, 40S ribosomal protein uS15, 40S ribosomal protein uS17, 40S ribosomal protein eS17, 40S ribosomal protein uS19, 40S ribosomal protein eS19, 40S ribosomal protein eS21
Pairwise Interactions
Interactions annotated by FR3D:- 595 base-pairs
- 1,683 base-stacking
- 31 base-phosphate
- 43 base-ribose
RNA 3D Motifs
In the current release of the RNA 3D Motif Atlas, 3J7A contains:- 38 hairpin loops from 0 motif groups
- 88 internal loops from 0 motif groups
- 26 junction loops from 0 motif groups
3D Redundancy
3J7A has chains which belong to the following equivalence classes in the current representative set:- NR_all_63941.1 (1)
- NR_all_58276.1 (1)
- NR_4.0_63941.1 (1)
- NR_4.0_58276.1 (1)
- NR_3.5_63941.1 (1)
- NR_3.5_58276.1 (1)
- NR_20.0_63941.1 (1)
- NR_20.0_58276.1 (1)