3J81 Summary
- Structure title
- CryoEM structure of a partial yeast 48S preinitiation complex
- Authors
- Hussain, T., Llacer, J.L., Fernandez, I.S., Savva, C.G., Ramakrishnan, V.
- Release date
- 2014-11-05
- Experimental technique
- ELECTRON MICROSCOPY
- Resolution
- 4.0 Å
- Chains
- 3 RNA chains from , Kluyveromyces lactis, synthetic construct
- 39 other chains
- Nucleic acid compounds
- Other compounds
- Met-tRNAi, 18S rRNA, mRNA
- uS2, eS1, uS5, uS3, eS4, uS7, eS6, eS7, eS8, uS4, eS10, uS17, eS12, uS15, uS11, uS19, uS9, eS17, uS13, eS19, uS10, eS21, uS8, uS12, eS24, eS25, eS26, eS27, eS28, uS14, eS30, eS31, RACK1, eL41, eIF1A, eIF2 alpha, eIF2 gamma, eIF2 beta, eIF1
Pairwise Interactions
Interactions annotated by FR3D:- 479 base-pairs
- 1,690 base-stacking
- 135 base-phosphate
- 160 base-ribose
- 56 oxygen stacking
- 48 sugar-ribose
RNA 3D Motifs
In the current release of the RNA 3D Motif Atlas, 3J81 contains:- 44 hairpin loops from 0 motif groups
- 124 internal loops from 0 motif groups
- 28 junction loops from 0 motif groups
3D Redundancy
3J81 has chains which belong to the following equivalence classes in the current representative set:- NR_all_81815.5 (1)
- NR_all_45441.4 (1)
- NR_4.0_81815.5 (1)
- NR_4.0_45441.4 (1)
- NR_20.0_81815.5 (1)
- NR_20.0_45441.4 (1)