- Structure title
- A 1.9A crystal structure of the HDV ribozyme precleavage suggests both Lewis acid and general acid mechanisms contribute to phosphodiester cleavage
- Authors
- Chen, J.-H., Yajima, R., Chadalavada, D.M., Chase, E., Bevilacqua, P.C., Golden, B.L.
- Release date
- 2010-09-01
- Experimental technique
- X-RAY DIFFRACTION
- Resolution
- 1.9 Å
- Chains
-
1 RNA chain from
Homo sapiens
-
1 hybrid chain
-
0 other chains
- Nucleic acid compounds
The hepatitis delta virus ribozyme, DNA/RNA (5'-D(*(DUR))-D(*GP*G)-R(P*CP*UP*UP*GP*CP*A)-3')
- Other compounds
Pairwise Interactions
Interactions annotated by
FR3D:
View all
RNA 3D Motifs
In the current release of the
RNA 3D Motif Atlas, 3NKB contains:
-
2 hairpin loops from 2 motif groups
-
2 internal loops from 1 motif group
-
1 junction loop from 0 motif groups
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3D Redundancy
3NKB has chains which belong to the following equivalence classes in the current representative set:
Similar structures
None found
