3OIN Summary
- Structure title
- Crystal structure of Saccharomyces cerevisiae Nep1/Emg1 bound to S-adenosylhomocysteine and 1 molecule of cognate RNA
- Authors
- Thomas, S.R., LaRonde-LeBlanc, N.
- Release date
- 2010-12-01
- Experimental technique
- X-RAY DIFFRACTION
- Resolution
- 1.9 Å
- Chains
- 1 RNA chain from Saccharomyces cerevisiae
- 2 other chains
- Nucleic acid compounds
- Other compounds
- 5'-R(*GP*GP*GP*CP*UP*UP*CP*AP*AP*CP*GP*CP*CP*C)-3'
- Ribosomal RNA small subunit methyltransferase NEP1, Ribosomal RNA small subunit methyltransferase NEP1
Pairwise Interactions
Interactions annotated by FR3D:- 4 base-pairs
- 10 base-stacking
- 1 base-phosphate
- 1 base-ribose
RNA 3D Motifs
In the current release of the RNA 3D Motif Atlas, 3OIN contains:- 1 hairpin loop from 1 motif group
- 0 internal loops from 0 motif groups
- 0 junction loops from 0 motif groups
3D Redundancy
3OIN has chains which belong to the following equivalence classes in the current representative set:- NR_all_40560.3 (1) rep
- NR_4.0_40560.3 (1) rep
- NR_3.5_40560.3 (1) rep
- NR_3.0_40560.3 (1) rep
- NR_20.0_40560.3 (1) rep
- NR_2.5_40560.3 (1) rep
- NR_2.0_40560.3 (1) rep