- Structure title
- RNA Polymerase II initial transcribing complex with a 4nt DNA-RNA hybrid and soaked with AMPCPP
- Authors
- Cheung, A.C.M., Sainsbury, S., Cramer, P.
- Release date
- 2011-12-07
- Experimental technique
- X-RAY DIFFRACTION
- Resolution
- 3.9 Å
- Chains
-
1 RNA chain from
Saccharomyces cerevisiae
-
2 DNA chains
-
-
12 other chains
- Nucleic acid compounds
5'-R(*AP*GP*GP*A)-3', 5'-D(*AP*AP*GP*TP*AP*CP*TP)-3', 5'-D(*AP*GP*CP*TP*CP*AP*AP*GP*TP*AP*CP*TP*TP*TP* TP*TP*CP*CP*BRUP*GP*GP*TP*CP*AP*TP*T)-3'
- Other compounds
DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB3, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4, DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1, DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB7, DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC3, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB9, DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC5, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB11, DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC4
Pairwise Interactions
Interactions annotated by
FR3D:
View all
RNA 3D Motifs
In the current release of the
RNA 3D Motif Atlas, 4A3M contains:
-
0 hairpin loops from 0 motif groups
-
1 internal loop from 0 motif groups
-
0 junction loops from 0 motif groups
More
3D Redundancy
This PDB is not included in any representative set equivalence class. Possibly, this PDB doesn't contain any complete nucleotides.
Similar structures
None found
