4E8K Summary
- Structure title
- Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Ca2+ and a non-hydrolyzed oligonucleotide substrate
- Authors
- Marcia, M., Pyle, A.M.
- Release date
- 2012-11-14
- Experimental technique
- X-RAY DIFFRACTION
- Resolution
- 3.0 Å
- Chains
- 2 RNA chains from Oceanobacillus iheyensis,
- 0 other chains
- Nucleic acid compounds
- Other compounds
- Group IIC intron, 5'-R(*CP*G*AP*UP*UP*UP*AP*UP*UP*A)-3'
Pairwise Interactions
Interactions annotated by FR3D:- 162 base-pairs
- 435 base-stacking
- 15 base-phosphate
- 25 base-ribose
RNA 3D Motifs
In the current release of the RNA 3D Motif Atlas, 4E8K contains:- 9 hairpin loops from 0 motif groups
- 17 internal loops from 0 motif groups
- 3 junction loops from 0 motif groups
3D Redundancy
4E8K has chains which belong to the following equivalence classes in the current representative set:- NR_all_35054.11 (1)
- NR_4.0_35054.11 (1)
- NR_3.5_35054.11 (1)
- NR_20.0_35054.11 (1)
Similar structures
9C6J 9C6I 3IGI 8OLV 5J02 4Y1O 4Y1O 4FAR 4E8N 6T3S 8OLY 4FAX 4FAU 8OLS 4FAW 5J01 4FB0 4E8Q 4E8P 6T3R 4E8T 8RUI 8RUJ 6T3N 3EOH 8RUM 8RUL 4FAQ 4Y1N 4Y1N 4E8R 8OLZ 6T3K 8RUH 3G78 8RUN 8OLW 4E8M 8RUK 9G4J 4DS6 9QTJ 3EOG 3BWP 9G4I 9G4L 9G4V 8OM0 4E8V 9G54 9G56Structures from NR_all_35054.11