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4NIA Summary

View in PDB or NAKB
Circular interaction diagram
Structure title
Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS Restraints
Authors
Larson, S.B., Day, J.S., McPherson, A.
Release date
2014-09-10
Experimental technique
X-RAY DIFFRACTION
Resolution
1.8 Å
Chains
45 RNA chains from Tobacco virtovirus 1
15 other chains
Nucleic acid compounds
RNA (5'-R(P*UP*U)-3'), RNA (5'-R(P*UP*U)-3'), RNA (5'-R(P*UP*U)-3'), RNA (5'-R(P*UP*U)-3'), RNA (5'-R(P*UP*U)-3'), RNA (5'-R(P*UP*U)-3'), RNA (5'-R(P*UP*U)-3'), RNA (5'-R(P*UP*U)-3'), RNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3'), RNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3'), RNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3'), RNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3'), RNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3'), RNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3'), RNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3'), RNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3'), RNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3'), RNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3'), RNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3'), RNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3'), RNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3'), RNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3'), RNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3'), RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3'), RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3'), RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3'), RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3'), RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3'), RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3'), RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3'), RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3'), RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3'), RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3'), RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3'), RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3'), RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3'), RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3'), RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3'), RNA (5'-R(P*UP*U)-3'), RNA (5'-R(P*UP*U)-3'), RNA (5'-R(P*UP*U)-3'), RNA (5'-R(P*UP*U)-3'), RNA (5'-R(P*UP*U)-3'), RNA (5'-R(P*UP*U)-3'), RNA (5'-R(P*UP*U)-3')
Other compounds
Coat protein, Coat protein, Coat protein, Coat protein, Coat protein, Coat protein, Coat protein, Coat protein, Coat protein, Coat protein, Coat protein, Coat protein, Coat protein, Coat protein, Coat protein

Pairwise Interactions

Interactions annotated by FR3D: View all

RNA 3D Motifs

In the current release of the RNA 3D Motif Atlas, 4NIA contains:
  • 6 hairpin loops from 0 motif groups
  • 6 internal loops from 0 motif groups
  • 0 junction loops from 0 motif groups
More

3D Redundancy

4NIA has chains which belong to the following equivalence classes in the current representative set:

Similar structures

6D30 6J7Z 3ER9 5KAL 24BW 5KAL 5NEW 4OQ9 4OQ9 4OQ9 4OQ9 4OQ9 4OQ9 4OQ9 4OQ8 4OQ9 4OQ9 4OQ9 2VRT 4OQ9 4OQ9 4OQ9 4OQ9 2VRT 1DDL 9FIA 4OQ9
Structures from NR_all_21736.10
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