4PRF Summary
- Structure title
- A Second Look at the HDV Ribozyme Structure and Dynamics.
- Authors
- Kapral, G.J., Jain, S., Noeske, J., Doudna, J.A., Richardson, D.C., Richardson, J.S.
- Release date
- 2014-10-29
- Experimental technique
- X-RAY DIFFRACTION
- Resolution
- 2.4 Å
- Chains
- 1 RNA chain from unknown source
- 1 other chain
- Nucleic acid compounds
- Other compounds
- Hepatitis Delta virus ribozyme
- U1 small nuclear ribonucleoprotein A
Pairwise Interactions
Interactions annotated by FR3D:- 27 base-pairs
- 71 base-stacking
- 1 base-phosphate
- 0 base-ribose
RNA 3D Motifs
In the current release of the RNA 3D Motif Atlas, 4PRF contains:- 2 hairpin loops from 2 motif groups
- 2 internal loops from 0 motif groups
- 0 junction loops from 0 motif groups
3D Redundancy
4PRF has chains which belong to the following equivalence classes in the current representative set:- NR_all_73165.5 (1) rep
- NR_4.0_73165.5 (1) rep
- NR_3.5_73165.5 (1) rep
- NR_3.0_73165.5 (1) rep
- NR_20.0_73165.5 (1) rep
- NR_2.5_73165.5 (1) rep