4TUE Summary
- Structure title
- Crystal structure of ASL-SufJ bound to Codon ACC-U on the Ribosome
- Authors
- Release date
- 2015-05-13
- Experimental technique
- X-RAY DIFFRACTION
- Resolution
- 3.5 Å
- Chains
- 14 RNA chains from Thermus thermophilus, Vittia pachyloma, synthetic construct
- 98 other chains
- Nucleic acid compounds
- Other compounds
- 16S rRNA, P-site tRNA-fMet, messenger RNA, A-site ASL-SufJ, 23S rRNA, 5S rRNA, 16S rRNA, P-site tRNA-fMet, messenger RNA, A-site ASL-SufJ, 23S rRNA, 5S rRNA, CC-Puro, CC-Puro
- 30S ribosomal protein S2, 30S ribosomal protein S3, 30S ribosomal protein S4, 30S ribosomal protein S5, 30S ribosomal protein S6, 30S ribosomal protein S7, 30S ribosomal protein S8, 30S ribosomal protein S9, 30S ribosomal protein S10, 30S ribosomal protein S11, 30S ribosomal protein S12, 30S ribosomal protein S13, 30S ribosomal protein S14 type Z, 30S ribosomal protein S15, 30S ribosomal protein S16, 30S ribosomal protein S17, 30S ribosomal protein S18, 30S ribosomal protein S19, 30S ribosomal protein S20, 30S ribosomal protein Thx, 50S ribosomal protein L27, 50S ribosomal protein L28, 50S ribosomal protein L29, 50S ribosomal protein L30, 50S ribosomal protein L31, 50S ribosomal protein L32, 50S ribosomal protein L33, 50S ribosomal protein L34, 50S ribosomal protein L35, 50S ribosomal protein L36, 50S ribosomal protein L2, 50S ribosomal protein L3, 50S ribosomal protein L4, 50S ribosomal protein L5, 50S ribosomal protein L6, 50S ribosomal protein L9, 50S ribosomal protein L13, 50S ribosomal protein L14, 50S ribosomal protein L15, 50S ribosomal protein L16, 50S ribosomal protein L17, 50S ribosomal protein L18, 50S ribosomal protein L19, 50S ribosomal protein L20, 50S ribosomal protein L21, 50S ribosomal protein L22, 50S ribosomal protein L23, 50S ribosomal protein L24, 50S ribosomal protein L25, 30S ribosomal protein S2, 30S ribosomal protein S3, 30S ribosomal protein S4, 30S ribosomal protein S5, 30S ribosomal protein S6, 30S ribosomal protein S7, 30S ribosomal protein S8, 30S ribosomal protein S9, 30S ribosomal protein S10, 30S ribosomal protein S11, 30S ribosomal protein S12, 30S ribosomal protein S13, 30S ribosomal protein S14 type Z, 30S ribosomal protein S15, 30S ribosomal protein S16, 30S ribosomal protein S17, 30S ribosomal protein S18, 30S ribosomal protein S19, 30S ribosomal protein S20, 30S ribosomal protein Thx, 50S ribosomal protein L27, 50S ribosomal protein L28, 50S ribosomal protein L29, 50S ribosomal protein L30, 50S ribosomal protein L31, 50S ribosomal protein L32, 50S ribosomal protein L33, 50S ribosomal protein L34, 50S ribosomal protein L35, 50S ribosomal protein L36, 50S ribosomal protein L2, 50S ribosomal protein L3, 50S ribosomal protein L4, 50S ribosomal protein L5, 50S ribosomal protein L6, 50S ribosomal protein L9, 50S ribosomal protein L13, 50S ribosomal protein L14, 50S ribosomal protein L15, 50S ribosomal protein L16, 50S ribosomal protein L17, 50S ribosomal protein L18, 50S ribosomal protein L19, 50S ribosomal protein L20, 50S ribosomal protein L21, 50S ribosomal protein L22, 50S ribosomal protein L23, 50S ribosomal protein L24, 50S ribosomal protein L25
Pairwise Interactions
Interactions annotated by FR3D:- 3,823 base-pairs
- 9,714 base-stacking
- 210 base-phosphate
- 259 base-ribose
RNA 3D Motifs
In the current release of the RNA 3D Motif Atlas, 4TUE contains:- 231 hairpin loops from 4 motif groups
- 363 internal loops from 0 motif groups
- 133 junction loops from 0 motif groups
3D Redundancy
4TUE has chains which belong to the following equivalence classes in the current representative set:- NR_all_65795.81 (2)
- NR_all_95119.1 (2)
- NR_all_97519.75 (2)
- NR_all_42622.75 (2)
- NR_all_72820.2 (2) rep
- NR_4.0_65795.81 (2)
- NR_4.0_95119.1 (2)
- NR_4.0_97519.75 (2)
- NR_4.0_42622.75 (2)
- NR_4.0_72820.2 (2) rep
- NR_3.5_65795.81 (2)
- NR_3.5_95119.1 (2)
- NR_3.5_97519.75 (2)
- NR_3.5_42622.75 (2)
- NR_3.5_72820.2 (2) rep
- NR_20.0_65795.81 (2)
- NR_20.0_95119.1 (2)
- NR_20.0_97519.75 (2)
- NR_20.0_42622.75 (2)
- NR_20.0_72820.2 (2) rep
Similar structures
4LFB 5WNV 4DR6 4LF8 4LF7 4X65 5WNT 8VTW 4JI1 9DFC 8VTW 4X64 4LF9 4DUY 4DR2 4Y4O 9DFE 4LF6 7RQB 9DFE 9DFC 8FC5 8FC6 9D0J 7DUI 4Y4O 4LF4 9DFD 8FC2 4DR5 8FC5 8FC6 8G2C 4DV6 4JI7 4KHP 4V9H 5FDV 4X62 8FC2 7DUL 9DFD 5FDV 7RQB 8FC1 8VTU 5FDU 4DV7 8UD7 8G2A 5FDU 5WNU 8T8B 4DR3 4JI3 6CAE 4JYA 8G2A 5HCQ 8VTY 8VTU 4JI6 5WNP 8UD7 8FC3 5IBB 6CFL 4LFC 8G29 7RQE 5IBB 8G2C 4JI0 8VTV 5HCQ 7U2H 6XHX 8UVS 8VTX 7U2J 8UVR 4WQ1 8UD8 4WSM 9D0J 8T8B 8FC3 8UD6 4WSM 5J4B 4WQR 8FC1 5IB7 8G2B 8VTY 4X66 6MPF 7RQ8 8VTV 6CFK 4WZD 5E81 8G29 8UD8 5EL7 6CFL 8EKB 6XHX 4JI8 4WZD 6XHY 8EV7 5E81 6CAE 5EL7 7U2J 7RQE 4DR1 4WQ1 8VTX 2UUC 4WQR 8G2B 4LFA 8EKB 9D7T 4DV5 6CFJ 6OF1 6CFK 9D7R 4DV0 9D7R 5J4C 5W4K 5EL6 4DV3 8T8C 7RQC 5IB8 5DFE 5J4B 6QNR 5IB7 6MPI 6CAP 5EL6 9D7T 5J8B 4DV4 7U2H 6XHY 4Z8C 8UVR 6QNR 5HCR 8UD6 6CAQ 5WIS 7AZO 5DFE 8EV7 4WSD 5NDK 8UVS 4Z8C 7AZO 4V8I 9D7S 5IB8 2UXC 6OF1 6XHW 7U2I 5NDK 6ND5 6NY6 4WPO 2VQF 4K0K 8T8C 4Z3S 1VY4 5EL4 8FC4 5HCR 6CFJ 4JI2 7RQC 6XHV 8EV6 4V6G 4DR4 4V5F 2VQE 9D7S 4WT8 5J4C 6FKR 4LNT 2UUA 4NXN 7MD7 4V6G 4V8D 4DUZ 5EL4 4JV5 7RQ8 4W2I 5W4K 6QNQ 5HD1 4LNT 4LF5 5HCP 4JI4 4W2I 2UU9 4DV1 6FKR 8CVK 8G2D 4W2G 8FC4 7RQD 6QNQ 6O97 4WPO 9B00 4V8D 4Z3S 4V5R 4V5F 6XHV 4DV2 4NXM 5E7K 5IWA 6MKN 5EL5 4WSD 5HCP 5HAU 6XHW 6ND5 4W2G 8EV6 4GKK 5E7K 4V5R 4WT8 7U2I 5WIS 5HAU 5HD1 4W2H 7RQD 4Y4P 5WIT 4V95 4WT1 4V7M 4V8I 4W4G 4W2H 4JI5 5DOY 4GKJ 8CVK 4V8B 5WNQ 7MD7 4W4G 4W2F 5WNS 1FJG 8CVJ 1VY4 4WRA 8G2D 5DOY 4V9B 4WR6 5VP2 6O97 1IBL 4V9B 4WRA 4W2E 4DR7 7RQ9 6C5L 7RQA 6C5L 4V8B 4V95 7JQM 6XQD 7RQA 6XQD 4V9S 4WU1 1VY5 4WU1 4WR6 4V7J 4ZER 4ZER 4YZV 4V9S 6DTI 8CVL 5WIT 6ND6 9B00 4V7J 4WQU 4V9R 7RQ9 6UO1 4WT1 4V9R 5EL5 4Y4P 4W2F 4WZO 1HNW 4YPB 4V5J 4WZO 8CVJ 4V5Q 4V5P 4V5S 6UO1 1VY7 4ZSN 4YPB 8CVL 4V5L 4YZV 4WQF 1VY6 4V5C 5VP2 4V5P 4V5J 3OTO 5NDJ 7JQM 4WRO 6ND6 5V8I 1XNR 4V5S 4V6F 4ZSN 5NDJ 4L47 1XMQ 1VY5 4V6F 4V51 4V7M 4L47 4V8C 1HR0 4V5Q 1VY6 7JQL 6CAO 1IBM 4WQF 4V8C 4TUA 4V8Q 6GSK 4V5D 1HNZ 4TUD 4V7K 6GSK 4TUA 4WQU 6CAS 4V51 6CAR 7JQL 4V9A 5V8I 1VY7 4V5K 4V7K 4TUC 4V5E 2UXB 4YHH 4WQY 4P6F 4TUD 4V5C 4WRO 7LH5 4V87 4V8E 5F8K 1IBK 4V5D 1N32 3T1H 3T1Y 4V87 4V8E 4V5E 1XNQ 4V90 4V8H 4P6F 4TUB 4V8F 4V9A 2HHH 6XQE 4LSK 4YY3 4TUB 5F8K 4V8H 7LH5 6XQE 4V83 4WQY 4V7L 4V97 4V8F 7AZS 4TUC 4V8G 4V9K 4V9K 6N9F 6N9E 4V97 4V9I 4LSK 5CZP 1VVJ 4LT8 4LT8 5CZP 7AZS 6N9F 4V9Q 4V7L 4V67 4KVB 6N9E 4V9I 5VPO 1VVJ 4OX9 5VPO 4L71 5WNR 6B4V 6B4V 4LFZ 4V83 4P70 4V8A 1HNX 6N1D 4P70 4V8A 6N1D 4L71 4LFZ 4V9Q 2UXD 6UCQ 1N33 4V67 4V8J 4XEJ 4V8J 4XEJ 4V7Y 4V9L 4V7Y 4V7P 4V7P 4V63 4V8G 4V9L 4V84 4LEL 5D8B 5DOX 4V9M 6UCQ 4V9M 4V5G 4V5G 5DOX 4V63 4LEL 4V5K 4V84 4V4J 5D8B 4V7W 1XMO 4V7X 4V7X 2E5L 4V7W 4V7Z 4V7Z 4V5A 4V5A 2ZM6 4V4I 1N36 4V8O 1N34 2UUB 4V4R 4V4T 4V4S 4V4X 4V4Z 4V4Y 4V4P 4B3M 4B3T 4B3R 6GSJ 6GSJ 4B3S 5BR8 1J5E 5J4D 5J4D 4AQY 4V8X 4V6A 4V6A 4V8U 4V8U 4V9N 4V8X 4V8N 4V8N 4V9J 4V9N 4V9J 6GSL 6GSL 7DUK 7DUH 7DUG 7DUJ 6BOK 6BOK 6BOH 6BOH 5VPP 5VPP 5UQ8 5J3C 5J3C 6ORD 6ORD 6OTR 6OPE 6OTR 6OPE 6NTA 6NTA 6BZ6 5J30 6OJ2 6BZ6 6OJ2 5J30 6OF6 6OXA 5UQ7 6OF6 6NUO 6OXA 6NUO 7V2L 1FKA 6NSH 6NSH 7V2M 6OXI 6OXI 7V2Q 6NWY 6GZQ 6NWY 7V2O 7V2P 8FOM 6BUW 6BUW 8FOM 8FON 8FON 6NDK 1I94 6BZ8 6BZ7 6NDK 6BZ8 6BZ7 5ZLU 6Q95 5OT7 7V2N 6O3M 6O3M 5LMN 6OSI 6OSI 6GZZ 6GZZ 1I96 1I95 5LMQ 5LMU 5LMT 6GZX 5LMO 6GZX 2F4V 1JGQ 5LMR 5LMV 4V42 1JGO 5LMS 5IMQ 5LMP 1I97 4V68 1JGP 5IMR 4V5N 4V5M 5A9Z 5AA0Structures from NR_all_65795.81