5B2P Summary
- Structure title
- Crystal structure of Francisella novicida Cas9 in complex with sgRNA and target DNA (TGA PAM)
- Authors
- Release date
- 2016-03-02
- Experimental technique
- X-RAY DIFFRACTION
- Resolution
- 1.7 Å
- Chains
- 1 hybrid chain
-
2 DNA chains
- 1 other chain
- Nucleic acid compounds
- Other compounds
- Guide RNA, Target DNA, DNA (5'-D(*TP*GP*AP*TP*AP*TP*CP*GP*G)-3')
- CRISPR-associated endonuclease Cas9
Pairwise Interactions
Interactions annotated by FR3D:- 59 base-pairs
- 144 base-stacking
- 1 base-phosphate
- 1 base-ribose
RNA 3D Motifs
In the current release of the RNA 3D Motif Atlas, 5B2P contains:- 4 hairpin loops from 3 motif groups
- 6 internal loops from 2 motif groups
- 0 junction loops from 0 motif groups
3D Redundancy
5B2P has chains which belong to the following equivalence classes in the current representative set:- NR_all_29293.2 (1) rep
- NR_4.0_29293.2 (1) rep
- NR_3.5_29293.2 (1) rep
- NR_3.0_29293.2 (1) rep
- NR_20.0_29293.2 (1) rep
- NR_2.5_29293.2 (1) rep
- NR_2.0_29293.2 (1) rep