5FW3 Summary
- Structure title
- Crystal structure of SpCas9 variant VRER bound to sgRNA and TGCG PAM target DNA
- Authors
- Release date
- 2016-06-15
- Experimental technique
- X-RAY DIFFRACTION
- Resolution
- 2.7 Å
- Chains
- 1 RNA chain from synthetic construct
-
2 DNA chains
- 1 other chain
- Nucleic acid compounds
- Other compounds
- SGRNA, TARGET DNA STRAND, NON-TARGET DNA STRAND
- CRISPR-ASSOCIATED ENDONUCLEASE CAS9/CSN1
Pairwise Interactions
Interactions annotated by FR3D:- 44 base-pairs
- 125 base-stacking
- 1 base-phosphate
- 1 base-ribose
RNA 3D Motifs
In the current release of the RNA 3D Motif Atlas, 5FW3 contains:- 3 hairpin loops from 0 motif groups
- 7 internal loops from 0 motif groups
- 0 junction loops from 0 motif groups
3D Redundancy
5FW3 has chains which belong to the following equivalence classes in the current representative set:- NR_all_66773.2 (1)
- NR_4.0_66773.2 (1)
- NR_3.5_66773.2 (1)
- NR_3.0_66773.2 (1)
- NR_20.0_66773.2 (1)