5IT9 Summary
- Structure title
- Structure of the yeast Kluyveromyces lactis small ribosomal subunit in complex with the cricket paralysis virus IRES.
- Authors
- Release date
- 2016-05-18
- Experimental technique
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
- Chains
- 2 RNA chains from Kluyveromyces lactis, Cricket paralysis virus
- 33 other chains
- Nucleic acid compounds
- Other compounds
- 18S ribosomal RNA, Cricket paralysis virus IRES RNA
- Ribosomal protein uS2, Ribosomal protein eS1, Ribosomal protein uS5, Ribosomal protein uS3, Ribosomal protein eS4, Ribosomal protein uS7, Ribosomal protein eS6, Ribosomal protein eS7, Ribosomal protein eS8, Ribosomal protein uS4, Ribosomal protein eS10, Ribosomal protein uS17, Ribosomal protein eS12, Ribosomal protein uS15, Ribosomal protein uS14, Ribosomal protein uS19, Ribosomal protein uS9, Ribosomal protein eS17, Ribosomal protein uS13, Ribosomal protein eS19, Ribosomal protein uS10, Ribosomal protein eS21, Ribosomal protein uS8, Ribosomal protein uS21, Ribosomal protein eS24, Ribosomal protein eS25, Ribosomal protein eS26, Ribosomal protein eS27, Ribosomal protein eS28, Ribosomal protein eS29, Ribosomal protein eS30, Ribosomal protein eS31, Ribosomal protein RACK1
Pairwise Interactions
Interactions annotated by FR3D:- 559 base-pairs
- 1,768 base-stacking
- 34 base-phosphate
- 43 base-ribose
RNA 3D Motifs
In the current release of the RNA 3D Motif Atlas, 5IT9 contains:- 47 hairpin loops from 0 motif groups
- 106 internal loops from 0 motif groups
- 30 junction loops from 0 motif groups
3D Redundancy
5IT9 has chains which belong to the following equivalence classes in the current representative set:- NR_all_45441.4 (1)
- NR_all_68086.2 (1)
- NR_4.0_45441.4 (1)
- NR_4.0_68086.2 (1)
- NR_20.0_45441.4 (1)
- NR_20.0_68086.2 (1)