5OOL Summary
- Structure title
- Structure of a native assembly intermediate of the human mitochondrial ribosome with unfolded interfacial rRNA
- Authors
- Release date
- 2017-09-13
- Experimental technique
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
- Chains
- 2 RNA chains from Homo sapiens
- 54 other chains
- Nucleic acid compounds
- Other compounds
- 16S ribosomal RNA, mitochondrial tRNAVal
- 39S ribosomal protein L32, mitochondrial, 39S ribosomal protein L33, mitochondrial, 39S ribosomal protein L34, mitochondrial, 39S ribosomal protein L35, mitochondrial, 39S ribosomal protein L36, mitochondrial, 39S ribosomal protein L37, mitochondrial, 39S ribosomal protein L38, mitochondrial, 39S ribosomal protein L39, mitochondrial, 39S ribosomal protein L40, mitochondrial, 39S ribosomal protein L41, mitochondrial, 39S ribosomal protein L2, mitochondrial, 39S ribosomal protein L3, mitochondrial, 39S ribosomal protein L4, mitochondrial, 39S ribosomal protein L9, mitochondrial, 39S ribosomal protein L10, mitochondrial, 39S ribosomal protein L11, mitochondrial, 39S ribosomal protein L13, mitochondrial, 39S ribosomal protein L14, mitochondrial, 39S ribosomal protein L15, mitochondrial, 39S ribosomal protein L16, mitochondrial, 39S ribosomal protein L17, mitochondrial, 39S ribosomal protein L18, mitochondrial, 39S ribosomal protein L19, mitochondrial, 39S ribosomal protein L20, mitochondrial, 39S ribosomal protein L21, mitochondrial, 39S ribosomal protein L22, mitochondrial, 39S ribosomal protein L23, mitochondrial, 39S ribosomal protein L24, mitochondrial, 39S ribosomal protein L27, mitochondrial, 39S ribosomal protein L28, mitochondrial, 39S ribosomal protein L47, mitochondrial, 39S ribosomal protein L30, mitochondrial, 39S ribosomal protein L42, mitochondrial, 39S ribosomal protein L43, mitochondrial, 39S ribosomal protein L44, mitochondrial, 39S ribosomal protein L45, mitochondrial, 39S ribosomal protein L46, mitochondrial, 39S ribosomal protein L48, mitochondrial, 39S ribosomal protein L49, mitochondrial, 39S ribosomal protein L50, mitochondrial, 39S ribosomal protein L51, mitochondrial, 39S ribosomal protein L52, mitochondrial, 39S ribosomal protein L53, mitochondrial, 39S ribosomal protein L54, mitochondrial, 39S ribosomal protein L55, mitochondrial, Ribosomal protein 63, mitochondrial, Peptidyl-tRNA hydrolase ICT1, mitochondrial, Growth arrest and DNA damage-inducible proteins-interacting protein 1, 39S ribosomal protein S18a, mitochondrial, 39S ribosomal protein S30, mitochondrial, Unknown protein or protein extension, Mitochondrial assembly of ribosomal large subunit protein 1, MIEF1 upstream open reading frame protein, Acyl carrier protein, mitochondrial
Pairwise Interactions
Interactions annotated by FR3D:- 534 base-pairs
- 1,457 base-stacking
- 34 base-phosphate
- 35 base-ribose
RNA 3D Motifs
In the current release of the RNA 3D Motif Atlas, 5OOL contains:- 40 hairpin loops from 0 motif groups
- 58 internal loops from 0 motif groups
- 18 junction loops from 0 motif groups
3D Redundancy
5OOL has chains which belong to the following equivalence classes in the current representative set:- NR_all_12763.32 (1)
- NR_all_73428.26 (1)
- NR_4.0_12763.32 (1)
- NR_4.0_73428.26 (1)
- NR_3.5_12763.32 (1)
- NR_3.5_73428.26 (1)
- NR_20.0_12763.32 (1)
- NR_20.0_73428.26 (1)
Similar structures
7QI4 8RRI 7QI5 7OF0 8ANY 8K2A 7OF6 7OF7 7OF4 7OF2 7QI6 7OF3 9CN3 7OF5 8OIT 8XT0 8XT1 8XT3 8XT2 8OIR 8QSJ 7ODS 7ODT 7PO4 7L20 7QH7 6ZSC 8K2B 7OIE 7OIA 6ZSD 7A5I 7OID 7L08 7OI8 7OG4 8PK0 7OIB 6ZSG 6ZSA 7QH6 6ZS9 6VMI 6VLZ 3J7Y 7OI9 3J9M 8QU1 6I9R 7OI7 6ZSB 6NU2 7A5G 7A5F 5OOM 6ZSE 6NU3 7OI6 8QU5 6ZM6 6ZM5 7ODR 7O9M 7O9K 7OIC 7A5J 7A5H 7A5K 7PD3Structures from NR_all_12763.32