5UZT Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_5UZT_016 | 1/A/32:43 | No text annotation | ||
| HL_5UZT_002 | 2/A/30:45 | No text annotation | ||
| HL_5UZT_011 | 3/A/31:44 | No text annotation | ||
| HL_5UZT_012 | 4/A/31:44 | No text annotation | ||
| HL_5UZT_013 | 5/A/31:44 | No text annotation | ||
| HL_5UZT_017 | 6/A/31:44 | No text annotation | ||
| HL_5UZT_014 | 7/A/31:44 | No text annotation | geometric HL_5NFV_001 HL_69752.4 | |
| HL_5UZT_015 | 8/A/30:45 | No text annotation | ||
| HL_5UZT_008 | 8/A/32:43 | No text annotation | geometric HL_4WF9_011 HL_75660.9 | |
| HL_5UZT_009 | 9/A/30:45 | No text annotation | ||
| HL_5UZT_010 | 10/A/30:45 | No text annotation |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_5UZT_001 | No text annotation | ||
| HL_5UZT_003 | No text annotation | ||
| HL_5UZT_004 | No text annotation | ||
| HL_5UZT_005 | tRNA D-loop | ||
| HL_5UZT_006 | No text annotation | ||
| HL_5UZT_007 | tRNA D-loop |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_5UZT_001 | 1/A/28:30, 1/A/45:46 | Single stack bend | geometric IL_4LFB_041 IL_15011.4 | |
| IL_5UZT_002 | 2/A/28:30, 2/A/45:46 | Single stack bend | geometric IL_4LFB_041 IL_15011.4 | |
| IL_5UZT_003 | 3/A/28:30, 3/A/45:46 | Single stack bend | geometric IL_4LFB_041 IL_15011.4 | |
| IL_5UZT_004 | 4/A/28:30, 4/A/45:46 | Single stack bend | geometric IL_4LFB_041 IL_15011.4 | |
| IL_5UZT_005 | 5/A/28:30, 5/A/45:46 | Single stack bend | geometric IL_4LFB_041 IL_15011.4 | |
| IL_5UZT_006 | 6/A/28:30, 6/A/45:46 | Single stack bend | geometric IL_4LFB_041 IL_15011.4 | |
| IL_5UZT_007 | 7/A/28:30, 7/A/45:46 | Single stack bend | geometric IL_4LFB_041 IL_15011.4 | |
| IL_5UZT_008 | 8/A/28:30, 8/A/45:46 | Single stack bend | geometric IL_4LFB_041 IL_15011.4 | |
| IL_5UZT_009 | 9/A/28:30, 9/A/45:46 | Single stack bend | geometric IL_5J7L_032 NA | |
| IL_5UZT_010 | 10/A/28:30, 10/A/45:46 | Single stack bend | geometric IL_4LFB_041 IL_15011.4 |
Problematic loops
No problematic loops
Valid loops
No loops found
Problematic loops
No problematic loops
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