5XUZ Summary
- Structure title
- Crystal structure of Lachnospiraceae bacterium ND2006 Cpf1 in complex with crRNA and target DNA (CCCA PAM)
- Authors
- Release date
- 2017-08-09
- Experimental technique
- X-RAY DIFFRACTION
- Resolution
- 2.4 Å
- Chains
- 2 RNA chains from synthetic construct
-
4 DNA chains
- 2 other chains
- Nucleic acid compounds
- Other compounds
- crRNA, crRNA, DNA (29-MER), DNA (5'-D(*CP*GP*TP*CP*CP*CP*CP*CP*A)-3'), DNA (29-MER), DNA (5'-D(*CP*GP*TP*CP*CP*CP*CP*CP*A)-3')
- LbCpf1, LbCpf1
Pairwise Interactions
Interactions annotated by FR3D:- 72 base-pairs
- 158 base-stacking
- 1 base-phosphate
- 2 base-ribose
RNA 3D Motifs
In the current release of the RNA 3D Motif Atlas, 5XUZ contains:- 2 hairpin loops from 1 motif group
- 6 internal loops from 0 motif groups
- 0 junction loops from 0 motif groups
3D Redundancy
5XUZ has chains which belong to the following equivalence classes in the current representative set:- NR_all_32338.2 (2) rep
- NR_4.0_32338.2 (2) rep
- NR_3.5_32338.2 (2) rep
- NR_3.0_32338.2 (2) rep
- NR_20.0_32338.2 (2) rep
- NR_2.5_32338.2 (2) rep