6AEG Summary
- Structure title
- Crystal structure of xCas9 in complex with sgRNA and target DNA (GAT PAM)
- Authors
- Release date
- 2019-03-27
- Experimental technique
- X-RAY DIFFRACTION
- Resolution
- 2.7 Å
- Chains
- 1 RNA chain from Streptococcus pyogenes
-
2 DNA chains
- 1 other chain
- Nucleic acid compounds
- Other compounds
- RNA (95-MER), DNA (25-MER), DNA (5'-D(*AP*AP*AP*GP*AP*TP*TP*AP*TP*TP*G)-3')
- DNA nuclease
Pairwise Interactions
Interactions annotated by FR3D:- 45 base-pairs
- 132 base-stacking
- 2 base-phosphate
- 1 base-ribose
RNA 3D Motifs
In the current release of the RNA 3D Motif Atlas, 6AEG contains:- 4 hairpin loops from 0 motif groups
- 3 internal loops from 0 motif groups
- 0 junction loops from 0 motif groups
3D Redundancy
6AEG has chains which belong to the following equivalence classes in the current representative set:- NR_all_66773.2 (1)
- NR_4.0_66773.2 (1)
- NR_3.5_66773.2 (1)
- NR_3.0_66773.2 (1)
- NR_20.0_66773.2 (1)