6DME Summary
- Structure title
- ppGpp Riboswitch bound to ppGpp, thallium acetate structure
- Authors
- Release date
- 2018-11-14
- Experimental technique
- X-RAY DIFFRACTION
- Resolution
- 2.7 Å
- Chains
- 1 RNA chain from Sulfobacillus acidophilus
- 0 other chains
- Nucleic acid compounds
- Other compounds
- ppGpp Riboswitch
Pairwise Interactions
Interactions annotated by FR3D:- 45 base-pairs
- 113 base-stacking
- 1 base-phosphate
- 2 base-ribose
RNA 3D Motifs
In the current release of the RNA 3D Motif Atlas, 6DME contains:- 3 hairpin loops from 3 motif groups
- 3 internal loops from 3 motif groups
- 1 junction loop from 0 motif groups
3D Redundancy
6DME has chains which belong to the following equivalence classes in the current representative set:- NR_all_86427.3 (1) rep
- NR_4.0_86427.3 (1) rep
- NR_3.5_86427.3 (1) rep
- NR_3.0_86427.3 (1) rep
- NR_20.0_86427.3 (1) rep