6OY5 Summary
- Structure title
- X-ray crystal structure of a bacterial reiterative transcription complex of pyrG promoter at 3 min
- Authors
- Release date
- 2019-06-05
- Experimental technique
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
- Chains
- 1 RNA chain from Thermus thermophilus
-
2 DNA chains
- 6 other chains
- Nucleic acid compounds
- Other compounds
- RNA (5'-D(*(GTP))-R(P*G)-3'), DNA (5'-D(P*CP*CP*GP*CP*AP*TP*CP*AP*GP*AP*GP*CP*CP*CP*AP*AP*AP*AP*T)-3'), DNA (5'-D(*AP*TP*AP*AP*TP*GP*GP*GP*AP*GP*CP*CP*TP*CP*TP*GP*AP*TP*GP*CP*AP*G)-3')
- DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', DNA-directed RNA polymerase subunit omega, RNA polymerase sigma factor SigA
Pairwise Interactions
Interactions annotated by FR3D:- 10 base-pairs
- 34 base-stacking
- 0 base-phosphate
- 0 base-ribose
- 0 oxygen stacking
- 0 sugar-ribose
RNA 3D Motifs
In the current release of the RNA 3D Motif Atlas, 6OY5 contains:- 0 hairpin loops from 0 motif groups
- 4 internal loops from 0 motif groups
- 0 junction loops from 0 motif groups
3D Redundancy
6OY5 has chains which belong to the following equivalence classes in the current representative set:- NR_all_98428.8 (1)
- NR_4.0_98428.8 (1)
- NR_3.5_98428.8 (1)
- NR_20.0_98428.8 (1)
Similar structures
6N6I 6N6I 6N6A 7MPL 7MPL 7MPL 7MPL 7MPL 7MPL 7MPL 7MPL 9F7M 9F7M 9F7M 9F7M 9F7M 9F7M 9F7M 9F7M 7VA3 7MPU 6IJ2 6IJ2 6IJ2 6IJ2 3U2E 3U2E 5MFU 7PVK 7PVK 7MPQ 7PVK 7MQB 7MQB 7MQB 7MQB 7MQB 7MQB 7MQB 7MQB 7EH1 7PVK 5UEF 7MQC 7MQC 5UEF 7MQC 7MQC 9RTC 7EH2 7EH2 9RTC 7MQC 7MQC 7MQC 7MQC 4X4T 3UCZ 9RTC 4X4U 4AFY 6YMW 6OWL 4AFY 6OWL 6S0M 4LQ3 3UCU 1UVK 1UVK 1UVKStructures from NR_all_98428.8