6OZP Summary
- Structure title
- Crystal structure of Mus musculus (Mm) Endonuclease V in complex with a 23mer RNA oligo containing an inosine after a 180 min soak in 10 mM Mn2+
- Authors
- Release date
- 2019-09-04
- Experimental technique
- X-RAY DIFFRACTION
- Resolution
- 2.0 Å
- Chains
- 2 RNA chains from synthetic construct
- 2 hybrid chains
- 2 other chains
- Nucleic acid compounds
- Other compounds
- RNA (5'-R(P*UP*AP*UP*GP*CP*AP*UP*GP*CP*AP*UP*U)-3'), RNA (5'-R(P*UP*AP*UP*GP*CP*AP*UP*GP*CP*AP*UP*U)-3'), DNA/RNA (5'-R(*CP*GP*GP*UP*AP*AP*CP*CP*C)-D(P*I)-R(P*A)-3'), DNA/RNA (5'-R(*CP*GP*GP*UP*AP*AP*CP*CP*C)-D(P*I)-R(P*A)-3')
- Endonuclease V, Endonuclease V
Pairwise Interactions
Interactions annotated by FR3D:- 12 base-pairs
- 30 base-stacking
- 0 base-phosphate
- 0 base-ribose
RNA 3D Motifs
In the current release of the RNA 3D Motif Atlas, 6OZP contains:- 0 hairpin loops from 0 motif groups
- 2 internal loops from 0 motif groups
- 0 junction loops from 0 motif groups
3D Redundancy
6OZP has chains which belong to the following equivalence classes in the current representative set:- NR_all_37706.3 (1) rep
- NR_all_97453.3 (2) rep
- NR_4.0_37706.3 (1) rep
- NR_4.0_97453.3 (2) rep
- NR_3.5_37706.3 (1) rep
- NR_3.5_97453.3 (2) rep
- NR_3.0_37706.3 (1) rep
- NR_3.0_97453.3 (2) rep
- NR_20.0_37706.3 (1) rep
- NR_20.0_97453.3 (2) rep
- NR_2.5_37706.3 (1) rep
- NR_2.5_97453.3 (2) rep
- NR_2.0_37706.3 (1) rep
- NR_2.0_97453.3 (2) rep