6TQB Pairwise Interaction Annotations: FR3D oxygen_stacking Download
Jmol._Canvas2D (Jmol) "jmolApplet0"[x]
loadScript https://rna.bgsu.edu/rna3dhub//js/jsmol/j2s//core/package.js
loadScript https://rna.bgsu.edu/rna3dhub//js/jsmol/j2s//core/corejmol.z.js
JSmol exec jmolApplet0 start applet null
Jmol JavaScript applet jmolApplet0__921095237176057__ initializing
Jmol getValue debug null
Jmol getValue logLevel null
Jmol getValue allowjavascript null
AppletRegistry.checkIn(jmolApplet0__921095237176057__)
vwrOptions:
{ "name":"jmolApplet0","applet":true,"documentBase":"https://rna.bgsu.edu/rna3dhub/pdb/6TQB/interactions/fr3d/oxygen_stacking","platform":"J.awtjs2d.Platform","fullName":"jmolApplet0__921095237176057__","codePath":"https://rna.bgsu.edu/rna3dhub//js/jsmol/j2s//","display":"jmolApplet0_canvas2d","signedApplet":"true","appletReadyCallback":"Jmol._readyCallback","statusListener":"[J.appletjs.Jmol object]","syncId":"921095237176057","bgcolor":"white" }
setting document base to "https://rna.bgsu.edu/rna3dhub/pdb/6TQB/interactions/fr3d/oxygen_stacking"
(C) 2015 Jmol Development
Jmol Version: 14.4.4_2016.04.25 2016-04-26 17:41
java.vendor: Java2Script (HTML5)
java.version: 2016-04-21 14:47:41 (JSmol/j2s)
os.name: Mozilla/5.0 AppleWebKit/537.36 (KHTML, like Gecko; compatible; ClaudeBot/1.0; +claudebot@anthropic.com)
Access: ALL
memory: 0.0/0.0
processors available: 1
useCommandThread: false
appletId:jmolApplet0 (signed)
loadScript https://rna.bgsu.edu/rna3dhub//js/jsmol/j2s//core/corescript.z.js
Jmol getValue emulate null
defaults = "Jmol"
Jmol getValue boxbgcolor null
Jmol getValue bgcolor white
backgroundColor = "white"
Jmol getValue ANIMFRAMECallback null
Jmol getValue APPLETREADYCallback Jmol._readyCallback
APPLETREADYCallback = "Jmol._readyCallback"
callback set for APPLETREADYCallback Jmol._readyCallback APPLETREADY
Jmol getValue ATOMMOVEDCallback null
Jmol getValue CLICKCallback null
Jmol getValue DRAGDROPCallback null
Jmol getValue ECHOCallback null
Jmol getValue ERRORCallback null
Jmol getValue EVALCallback null
Jmol getValue HOVERCallback null
Jmol getValue IMAGECallback null
Jmol getValue LOADSTRUCTCallback null
Jmol getValue MEASURECallback null
Jmol getValue MESSAGECallback null
Jmol getValue MINIMIZATIONCallback null
Jmol getValue SERVICECallback null
Jmol getValue PICKCallback null
Jmol getValue RESIZECallback null
Jmol getValue SCRIPTCallback null
Jmol getValue SYNCCallback null
Jmol getValue STRUCTUREMODIFIEDCallback null
Jmol getValue doTranslate null
language=en_US
Jmol getValue popupMenu null
Jmol getValue script null
Jmol getValue loadInline null
Jmol getValue load null
Jmol applet jmolApplet0__921095237176057__ ready
script 1 started
cache cleared
Script completed
Jmol script terminated
script 2 started
loadScript https://rna.bgsu.edu/rna3dhub//js/jsmol/j2s//core/coretext.z.js
Loading...
Script completed
Jmol script terminated
script 3 started
Loading...
Script completed
Jmol script terminated
script 4 started
Loading...
Script completed
Jmol script terminated
script 5 started
Loading...
Script completed
Jmol script terminated
loadScript https://rna.bgsu.edu/rna3dhub//js/jsmol/j2s//JV/PropertyManager.js
loadScript https://rna.bgsu.edu/rna3dhub//js/jsmol/j2s//core/coreprop.z.js
script 6 started
The Resolver thinks MMCif
loadScript https://rna.bgsu.edu/rna3dhub//js/jsmol/j2s//J/adapter/readers/cif/MMCifReader.js
loadScript https://rna.bgsu.edu/rna3dhub//js/jsmol/j2s//J/adapter/readers/cif/CifReader.js
loadScript https://rna.bgsu.edu/rna3dhub//js/jsmol/j2s//JU/CifDataParser.js
loadScript https://rna.bgsu.edu/rna3dhub//js/jsmol/j2s//core/corebio.z.js
view
reading 481 atoms
ModelSet: haveSymmetry:false haveUnitcells:false haveFractionalCoord:false
2 models in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.
model 1.2 alternative locations: AB
Default Van der Waals type for model set to Jmol
481 atoms created
ModelSet: autobonding; use autobond=false to not generate bonds automatically
Jmol 14.4.4_2016.04.25 2016-04-26 17:41 DSSP analysis for model 1.2 - view
Note: This model contains alternative locations. Use 'CONFIGURATION 1' to be consistent with CMBI DSSP.
Time for creating model: 51 ms
loadScript https://rna.bgsu.edu/rna3dhub//js/jsmol/j2s//JV/DataManager.js
loadScript https://rna.bgsu.edu/rna3dhub//js/jsmol/j2s//J/api/JmolDataManager.js
2 models
Script completed
Jmol script terminated
Coloring options: