6U8D Summary
- Structure title
- Crystal structure of hepatitis C virus IRES junction IIIabc in complex with Fab HCV2
- Authors
- Release date
- 2019-12-04
- Experimental technique
- X-RAY DIFFRACTION
- Resolution
- 1.8 Å
- Chains
- 1 RNA chain from Hepacivirus C
- 2 other chains
- Nucleic acid compounds
- Other compounds
- JIIIabc RNA (68-MER)
- Heavy chain of Fab HCV2, Light chain of Fab HCV2
Pairwise Interactions
Interactions annotated by FR3D:- 30 base-pairs
- 81 base-stacking
- 1 base-phosphate
- 1 base-ribose
RNA 3D Motifs
In the current release of the RNA 3D Motif Atlas, 6U8D contains:- 3 hairpin loops from 3 motif groups
- 0 internal loops from 0 motif groups
- 1 junction loop from 0 motif groups
3D Redundancy
6U8D has chains which belong to the following equivalence classes in the current representative set:- NR_all_20951.3 (1) rep
- NR_4.0_20951.3 (1) rep
- NR_3.5_20951.3 (1) rep
- NR_3.0_20951.3 (1) rep
- NR_20.0_20951.3 (1) rep
- NR_2.5_20951.3 (1) rep
- NR_2.0_20951.3 (1) rep