6XJQ Summary
- Structure title
- Crystal structure of a self-alkylating ribozyme - alkylated form with biotinylated epoxide substrate
- Authors
- Koirala, D., Piccirilli, J.A.
- Release date
- 2022-01-19
- Experimental technique
- X-RAY DIFFRACTION
- Resolution
- 1.7 Å
- Chains
- 2 RNA chains from Aeropyrum pernix
- 4 other chains
- Nucleic acid compounds
- Other compounds
- Self-alkylating ribozyme (58-MER), Self-alkylating ribozyme (58-MER)
- Fab HAVx Heavy Chain, Fab HAVx Light Chain, Fab HAVx Heavy Chain, Fab HAVx Light Chain
Pairwise Interactions
Interactions annotated by FR3D:- 52 base-pairs
- 114 base-stacking
- 1 base-phosphate
- 4 base-ribose
RNA 3D Motifs
In the current release of the RNA 3D Motif Atlas, 6XJQ contains:- 4 hairpin loops from 1 motif group
- 8 internal loops from 4 motif groups
- 0 junction loops from 0 motif groups
3D Redundancy
6XJQ has chains which belong to the following equivalence classes in the current representative set:- NR_all_49161.3 (2) rep
- NR_4.0_49161.3 (2) rep
- NR_3.5_49161.3 (2) rep
- NR_3.0_49161.3 (2) rep
- NR_20.0_49161.3 (2) rep
- NR_2.5_49161.3 (2) rep
- NR_2.0_49161.3 (2) rep