6YL5 Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_6YL5_001 | 1/A/15:24 | No text annotation | geometric HL_6YL5_005 HL_35677.5 | |
| HL_6YL5_002 | 1/C/15:24 | No text annotation | geometric HL_6YL5_005 HL_35677.5 | |
| HL_6YL5_003 | 1/E/15:24 | No text annotation | geometric HL_6YL5_005 HL_35677.5 | |
| HL_6YL5_004 | 1/G/15:24 | No text annotation | geometric HL_6YL5_005 HL_35677.5 | |
| HL_6YL5_005 | 1/I/15:24 | No text annotation HL_35677.5 | ||
| HL_6YL5_006 | 1/K/15:24 | No text annotation | geometric HL_6YL5_005 HL_35677.5 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_6YL5_002 | 1/A/12:15, 1/A/24:27 | Double sheared | geometric IL_6YL5_010 IL_58355.2 | |
| IL_6YL5_004 | 1/C/12:15, 1/C/24:27 | Double sheared | geometric IL_6YL5_010 IL_58355.2 | |
| IL_6YL5_006 | 1/E/12:15, 1/E/24:27 | Double sheared | geometric IL_6YL5_010 IL_58355.2 | |
| IL_6YL5_008 | 1/G/12:15, 1/G/24:27 | Double sheared | geometric IL_6YML_002 IL_58355.2 | |
| IL_6YL5_010 | 1/I/12:15, 1/I/24:27 | Double sheared IL_58355.2 | ||
| IL_6YL5_012 | 1/K/12:15, 1/K/24:27 | Double sheared | geometric IL_6YML_002 IL_58355.2 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_6YL5_001 | Isolated non-canonical cWW pair | ||
| IL_6YL5_003 | Isolated non-canonical cWW pair | ||
| IL_6YL5_005 | Isolated non-canonical cWW pair | ||
| IL_6YL5_007 | Isolated non-canonical cWW pair | ||
| IL_6YL5_009 | Isolated non-canonical cWW pair | ||
| IL_6YL5_011 | Isolated non-canonical cWW pair |
Valid loops
No loops found
Problematic loops
No problematic loops
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