7EDM Summary
- Structure title
- Crystal structure of the eukaryotic ribosomal decoding site in complex with G418 and Hg(II)
- Authors
- Kondo, J., Suzuki, C.
- Release date
- 2022-03-16
- Experimental technique
- X-RAY DIFFRACTION
- Resolution
- 2.8 Å
- Chains
- 2 RNA chains from synthetic construct
- 0 other chains
- Nucleic acid compounds
- Other compounds
- RNA (5'-R(P*UP*GP*CP*GP*UP*CP*GP*CP*GP*UP*CP*GP*AP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3'), RNA (5'-R(P*UP*GP*CP*GP*UP*CP*GP*CP*GP*UP*CP*GP*AP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3')
Pairwise Interactions
Interactions annotated by FR3D:- 16 base-pairs
- 40 base-stacking
- 0 base-phosphate
- 0 base-ribose
RNA 3D Motifs
In the current release of the RNA 3D Motif Atlas, 7EDM contains:- 0 hairpin loops from 0 motif groups
- 4 internal loops from 0 motif groups
- 0 junction loops from 0 motif groups
3D Redundancy
7EDM has chains which belong to the following equivalence classes in the current representative set:- NR_all_71199.7 (1)
- NR_4.0_71199.7 (1)
- NR_3.5_71199.7 (1)
- NR_3.0_71199.7 (1)
- NR_20.0_71199.7 (1)