7NWH Summary
- Structure title
- Mammalian pre-termination 80S ribosome with eRF1 and eRF3 bound by Blasticidin S.
- Authors
- Powers, K.T., Yadav, S.K.N., Bufton, J.C., Schaffitzel, C.
- Release date
- 2021-07-07
- Experimental technique
- ELECTRON MICROSCOPY
- Resolution
- 4.1 Å
- Chains
- 5 RNA chains from Oryctolagus cuniculus
- 79 other chains
- Nucleic acid compounds
- Other compounds
- 28S Ribosomal RNA, 5S Ribosomal RNA, 5.8S Ribosomal RNA, 18S Ribosomal RNA, mRNA
- 60S ribosomal protein L8, 40S_SA_C domain-containing protein, uL3, 40S ribosomal protein S3a, uL4, 40S ribosomal protein S2, 60S ribosomal protein L5, 40S ribosomal protein S3, 60S ribosomal protein L6, 40S ribosomal protein S4, uL30, Ribosomal protein S5, L7a, 40S ribosomal protein S6, L9, S7, 60S ribosomal protein L10, 40S ribosomal protein S8, 60S ribosomal protein L11, 40S ribosomal protein S9, 40S ribosomal protein S10, 60S ribosomal protein L13, 40S ribosomal protein S11, Ribosomal protein L14, 40S ribosomal protein S12, Ribosomal protein L15, ribosomal protein uS15, 60S RIBOSOMAL PROTEIN UL13, uS11, uL22, 40S ribosomal protein uS19, eL18, Ribosomal protein S16, 60S ribosomal protein L19, 40S ribosomal protein S17, 60S ribosomal protein L18a, 40S ribosomal protein uS13, eL21, eS19, L22, 40S ribosomal protein S20, eL14, 40S ribosomal protein S21, 60S ribosomal protein L24-like protein, Ribosomal protein S15a, uL23, 40S ribosomal protein uS12, Ribosomal protein L26, 40S ribosomal protein S24, 60S ribosomal protein L27, 40S ribosomal protein S25, 60S ribosomal protein L27a, 40S ribosomal protein S26, eL29, 40S ribosomal protein S27, eL30, 40S ribosomal protein S28, eL31, S29, Ribosomal protein L32, 40S ribosomal protein S30, eL33, 40S ribosomal protein S27a, 60S ribosomal protein L34, Epididymis tissue sperm binding protein Li 3a, uL29, 60S ribosomal protein L36, Eukaryotic peptide chain release factor subunit 1, Ribosomal protein L37, eRF3a, L38, eL39, 60S RIBOSOMAL PROTEIN EL40, 60s ribosomal protein l41, eL42, ribosomal protein eL43, eL28, 60S acidic ribosomal protein P0, uL12
Pairwise Interactions
Interactions annotated by FR3D:- 1,601 base-pairs
- 4,876 base-stacking
- 61 base-phosphate
- 76 base-ribose
RNA 3D Motifs
In the current release of the RNA 3D Motif Atlas, 7NWH contains:- 123 hairpin loops from 0 motif groups
- 282 internal loops from 0 motif groups
- 73 junction loops from 0 motif groups
3D Redundancy
7NWH has chains which belong to the following equivalence classes in the current representative set:- NR_all_06650.41 (1)
- NR_all_10255.41 (1)
- NR_all_21280.39 (1)
- NR_all_27268.1 (1) rep
- NR_20.0_06650.41 (1)
- NR_20.0_10255.41 (1)
- NR_20.0_21280.39 (1)
- NR_20.0_27268.1 (1) rep
Similar structures
7O7Y 7O7Z 7OYD 8SCB 7ZJW 7O80 8P2K 8RJB 9QQA 8B6C 8VVQ 8RJD 8B5L 9BDL 7UCK 8BPO 6SGC 7OBR 9F1B 7QWQ 7O81 7TOR 8RJC 7ZJX 7QWR 8VVP 7TOQ 7NWI 8BHF 8VVT 6R6P 6R5Q 9BDN 6P5I 6P5J 9F1D 6P5K 6ZVK 7UCJ 8VVR 8VVS 6P5N 7MDZ 6D9J 7NFX 7TM3 8BTK 9QQB 6T59 8VFT 8VVV 7A01 6MTD 5LZS 5LZV 7QWS 6MTE 6MTC 6D90 6GZ5 5LZZ 9F1C 6GZ3 5LZW 6MTB 6GZ4 9BDP 5LZT 7NWG 5LZX 6HCJ 6R6G 5LZU 7TUT 6FRK 8VVU 6HCF 3JAH 6R7Q 6FTI 3JAG 5LZY 3JAI 3J92 6FTJ 6HCQ 6HCM 4UJE 6FTG 3JAN 3JAJ 4UJD 4D67 4D5Y 4UJCStructures from NR_all_06650.41