7XD6 Summary
- Structure title
- The Tet-S2 state with a pseudoknotted 4-way junction of wild-type Tetrahymena group I intron with 30nt 3'/5'-exon
- Authors
- Luo, B., Zhang, C., Ling, X., Mukherjee, S., Jia, G., Xie, J., Jia, X., Liu, L., Baulin, E.F., Luo, Y., Jiang, L., Dong, H., Wei, X., Bujnicki, J.M., Su, Z.
- Release date
- 2023-04-05
- Experimental technique
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
- Chains
- 2 RNA chains from Tetrahymena thermophila
- 0 other chains
- Nucleic acid compounds
- Other compounds
- The Tet-S2 state with a pseudoknotted 4-way junction molecule of co-transcriptional folded wild-type Tetrahymena group I intron with 30nt 3'/5'-exon (5'-exon), The Tet-S2 state with a pseudoknotted 4-way junction molecule of co-transcriptional folded wild-type Tetrahymena group I intron with 30nt 3'/5'-exon (intron and 3'-exon)
Pairwise Interactions
Interactions annotated by FR3D:- 165 base-pairs
- 479 base-stacking
- 16 base-phosphate
- 33 base-ribose
- 12 oxygen stacking
- 19 sugar-ribose
RNA 3D Motifs
In the current release of the RNA 3D Motif Atlas, 7XD6 contains:- 13 hairpin loops from 0 motif groups
- 16 internal loops from 0 motif groups
- 5 junction loops from 0 motif groups
3D Redundancy
7XD6 has chains which belong to the following equivalence classes in the current representative set:- NR_all_69141.9 (1)
- NR_4.0_69141.9 (1)
- NR_3.5_69141.9 (1)
- NR_3.0_69141.9 (1)
- NR_20.0_69141.9 (1)