8AMI Summary
- Structure title
- Crystal structure of AUGUGGCAU duplex with barium ions (model 2)
- Authors
- Kiliszek, A., Rypniewski, W.
- Release date
- 2022-11-23
- Experimental technique
- X-RAY DIFFRACTION
- Resolution
- 1.8 Å
- Chains
- 2 RNA chains from Homo sapiens
- 0 other chains
- Nucleic acid compounds
- Other compounds
- RNA (5'-R(*AP*UP*GP*UP*GP*GP*CP*AP*U)-3'), RNA (5'-R(*AP*UP*GP*UP*GP*GP*CP*AP*U)-3')
Pairwise Interactions
Interactions annotated by FR3D:- 8 base-pairs
- 20 base-stacking
- 0 base-phosphate
- 0 base-ribose
RNA 3D Motifs
In the current release of the RNA 3D Motif Atlas, 8AMI contains:- 0 hairpin loops from 0 motif groups
- 1 internal loop from 1 motif group
- 0 junction loops from 0 motif groups
3D Redundancy
8AMI has chains which belong to the following equivalence classes in the current representative set:- NR_all_15912.3 (1) rep
- NR_4.0_15912.3 (1) rep
- NR_3.5_15912.3 (1) rep
- NR_3.0_15912.3 (1) rep
- NR_20.0_15912.3 (1) rep
- NR_2.5_15912.3 (1) rep
- NR_2.0_15912.3 (1) rep
Similar structures
8AMG 8AMG 8AMG 8AMG 8AMG 8AMM 8AMM 8AMG 8AMM 8AMM 8AMM 8AMM 8AMM 8AMM 8AMJ 8AMM 8AMM 8AMM 8AMM 8AMM 8AMM 8AMN 8AMN 8AMN 8AMN 8AMN 8AMN 8AMN 8AMN 8AMN 8AMN 8AMN 8AMN 8AMN 8AMN 8AMK 8AMK 8AMK 8AMK 8AMK 8AMK 8AMK 8AMK 8AMK 8AMK 8AMK 8AMK 8AMK 8AMK 8AML 8AML 8AML 8AML 8AML 8AML 8AML 8AML 8AML 8AML 8AML 8AML 8AML 8AMLStructures from NR_all_15912.3