- Structure title
- Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Dbp10-1
- Authors
- Lau, B., Huang, Z., Beckmann, R., Hurt, E., Cheng, J.
- Release date
- 2023-05-17
- Experimental technique
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
- Chains
-
3 RNA chains from
Thermochaetoides thermophila DSM 1495
-
52 other chains
- Nucleic acid compounds
RNA (3341-MER), RNA (256-MER), RNA (161-MER)
- Other compounds
Brix domain-containing protein, Ribosome biogenesis protein C8F11.04, Ribosome biogenesis protein ERB1, RNA helicase, Ribosome assembly factor mrt4, 60S ribosome subunit biogenesis protein NIP7, Nucleolar GTP-binding protein 1, Putative RNA-binding protein, Pescadillo homolog, Ribosome biogenesis protein NSA2 homolog, Putative GTP binding protein, 60S ribosomal protein l7-like protein, Eukaryotic translation initiation factor 6, DUF2423 domain-containing protein, RNA methyltransferase nop2-like protein, Ribosome biogenesis protein RLP24, Nucleolar protein 16, AdoMet-dependent rRNA methyltransferase SPB1, rRNA-processing protein EBP2, 60S ribosomal subunit-like protein, ATP-dependent RNA helicase DBP10, Ribosomal RNA-processing protein 1, Brix domain-containing protein, Protein MAK16, 60S ribosome biogenesis protein Rrp14, Brix domain-containing protein, Ribosomal RNA-processing protein 15, rRNA-processing protein, 60S ribosomal protein L3-like protein, 60S ribosomal protein L4-like protein, 60S ribosomal protein L6, 60S ribosomal protein l7-like protein, 60S ribosomal protein L8, 60S ribosomal protein l9-like protein, 60S ribosomal protein L12-like protein, 60S ribosomal protein L13, 60S ribosomal protein L14-like protein, Ribosomal protein L15, 60S ribosomal protein L16-like protein, 60S ribosomal protein l17-like protein, Ribosomal protein L18-like protein, 60S ribosomal protein L20, 60S ribosomal protein l21-like protein, 60S ribosomal protein l23-like protein, 60S ribosomal protein L25-like protein, 60S ribosomal protein L26-like protein, 60S ribosomal protein L32-like protein, 60S ribosomal protein l33-like protein, dolichyl-diphosphooligosaccharide--protein glycotransferase, 60S ribosomal protein L36, Ribosomal protein L37, Ribosomal protein
Pairwise Interactions
Interactions annotated by
FR3D:
View all
RNA 3D Motifs
In the current release of the
RNA 3D Motif Atlas, 8I9T contains:
-
51 hairpin loops from 0 motif groups
-
108 internal loops from 0 motif groups
-
23 junction loops from 0 motif groups
More
3D Redundancy
8I9T has chains which belong to the following equivalence classes in the current representative set:
Similar structures
None found
