8ID2 Summary
- Structure title
- Crystal structure of the ubiquitin-like domain in the SF3A1 subunit of human U2 snRNP complexed with the stem-loop 4 of U1 snRNA
- Authors
- Terawaki, S., Nameki, N., Kuwasako, K.
- Release date
- 2023-05-17
- Experimental technique
- X-RAY DIFFRACTION
- Resolution
- 1.8 Å
- Chains
- 2 RNA chains from Homo sapiens
- 2 other chains
- Nucleic acid compounds
- Other compounds
- RNA (5'-R(*GP*GP*GP*GP*AP*CP*UP*GP*CP*GP*UP*UP*CP*GP*CP*GP*CP*UP*UP*UP*CP*CP*CP*C)-3'), RNA (5'-R(*GP*GP*GP*GP*AP*CP*UP*GP*CP*GP*UP*UP*CP*GP*CP*GP*CP*UP*UP*UP*CP*CP*CP*C)-3')
- Splicing factor 3A subunit 1, Splicing factor 3A subunit 1
Pairwise Interactions
Interactions annotated by FR3D:- 22 base-pairs
- 57 base-stacking
- 1 base-phosphate
- 1 base-ribose
RNA 3D Motifs
In the current release of the RNA 3D Motif Atlas, 8ID2 contains:- 2 hairpin loops from 1 motif group
- 2 internal loops from 1 motif group
- 0 junction loops from 0 motif groups
3D Redundancy
8ID2 has chains which belong to the following equivalence classes in the current representative set:- NR_all_73563.3 (2) rep
- NR_4.0_73563.3 (2) rep
- NR_3.5_73563.3 (2) rep
- NR_3.0_73563.3 (2) rep
- NR_20.0_73563.3 (2) rep
- NR_2.5_73563.3 (2) rep
- NR_2.0_73563.3 (2) rep