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8OO0 Summary

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Circular interaction diagram PDF
Structure title
Chaetomium thermophilum Methionine Aminopeptidase 2 autoproteolysis product at the 80S ribosome
Authors
Klein, M.A., Wild, K., Kisonaite, M., Sinning, I.
Release date
2024-02-21
Experimental technique
ELECTRON MICROSCOPY
Resolution
3.1 Å
Chains
4 RNA chains from Thermochaetoides thermophila, Thermochaetoides thermophila DSM 1495
81 other chains
Nucleic acid compounds
28S rRNA, 18S rRNA, 5S rRNA, 5.8S rRNA
Other compounds
Putative guanine nucleotide-binding protein, Hyaluronan/mRNA-binding protein domain-containing protein, Ribosome-associated molecular chaperone SSB1, Methionine aminopeptidase 2, 60S ribosomal protein L2-like protein, 60S ribosomal protein L3-like protein, 60S ribosomal protein L4-like protein, 60S ribosomal protein l5-like protein, 60S ribosomal protein L6, 60S ribosomal protein l7-like protein, 60S ribosomal protein L8, 60S ribosomal protein l9-like protein, 60S ribosomal protein L10-like protein, Putative ribosomal protein, 60S ribosomal protein L12-like protein, 60S ribosomal protein L13, 60S ribosomal protein L14-like protein, Ribosomal protein L15, 60S ribosomal protein L16-like protein, 60S ribosomal protein l17-like protein, Ribosomal protein L18-like protein, Ribosomal protein L19, 60S ribosomal protein L20, 60S ribosomal protein l21-like protein, 60S ribosomal protein L22-like protein, 60S ribosomal protein l23-like protein, 60S ribosomal protein L24, 60S ribosomal protein L25-like protein, 60S ribosomal protein L26-like protein, 60S ribosomal protein L27, Ribosomal protein L18e/L15P domain-containing protein, 60S ribosomal protein L29, 60S ribosomal protein l30-like protein, Putative 60S ribosomal protein, 60S ribosomal protein L32-like protein, 60S ribosomal protein l33-like protein, Ribosomal protein l34-like protein, dolichyl-diphosphooligosaccharide--protein glycotransferase, 60S ribosomal protein L36, Ribosomal protein L37, 60S ribosomal protein L38, 60S ribosomal protein L39, Ubiquitin-like domain-containing protein, 60S ribosomal protein L41-A, 60S ribosomal protein L44-like protein, 60S ribosomal protein L43-like protein, Putative 60S ribosomal protein, 60S ribosomal protein L41-A, 60S acidic ribosomal protein P0, 40S ribosomal protein S0, 40S ribosomal protein S1, 40S ribosomal protein S2-like protein, 40S ribosomal protein S3-like protein, 40S ribosomal protein S4, 40S ribosomal protein s5-like protein, 40S ribosomal protein S6, 40S ribosomal protein S7, 40S ribosomal protein S8, 40S ribosomal protein s9-like protein, 40S ribosomal protein s10-like protein, 40S ribosomal protein S11-like protein, 40S ribosomal protein S12, 40S ribosomal protein S13-like protein, 40S ribosomal protein S14-like protein, 40S ribosomal protein s15-like protein, 40S ribosomal protein S16-like protein, 40S ribosomal protein S17-like protein, Putative ribosomal protein, 40S ribosomal protein S19-like protein, 40S ribosomal protein S20-like protein, 40S ribosomal protein S21-like protein, 40S ribosomal protein S22-like protein, 40S ribosomal protein s23-like protein, 40S ribosomal protein S24, 40S ribosomal protein S25, 40S ribosomal protein S26, Ribosomal protein s27-like protein, 40S ribosomal protein S28-like protein, 40S ribosomal protein S29, 40S ribosomal protein S30, 40S ribosomal protein S27a-like protein

Pairwise Interactions

Interactions annotated by FR3D: View all

RNA 3D Motifs

In the current release of the RNA 3D Motif Atlas, 8OO0 contains:
  • 123 hairpin loops from 0 motif groups
  • 307 internal loops from 0 motif groups
  • 82 junction loops from 0 motif groups
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3D Redundancy

8OO0 has chains which belong to the following equivalence classes in the current representative set:

Similar structures

8PV7 8PVL 9I78 8PV1 9I1W 8PVK 8PV2 8PV8 8PV4 8PV6 8PV3 7Z3N 7Z3O 8ONZ 8PV5 7OLC 7OLD 8IA0 8I9Z 8I9X 8I9Y 8I9W 8I9V 8I9R 8I9T 8I9P
Structures from NR_all_93493.10
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