- Structure title
- CryoEM structure of the RNA/DNA bound SPARTA (BabAgo/TIR-APAZ) tetrameric complex
- Authors
- Finocchio, G., Koopal, B., Potocnik, A., Heijstek, C., Jinek, M., Swarts, D.
- Release date
- 2024-01-31
- Experimental technique
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
- Chains
-
4 RNA chains from
Bacillales bacterium
-
4 DNA chains
-
-
8 other chains
- Nucleic acid compounds
RNA (5'-R(*AP*UP*GP*AP*CP*GP*GP*CP*UP*CP*UP*AP*AP*UP*CP*UP*AP*UP*UP*AP*GP*U)-3'), RNA (5'-R(*AP*UP*GP*AP*CP*GP*GP*CP*UP*CP*UP*AP*AP*UP*CP*UP*AP*UP*UP*AP*GP*U)-3'), RNA (5'-R(*AP*UP*GP*AP*CP*GP*GP*CP*UP*CP*UP*AP*AP*UP*CP*UP*AP*UP*UP*AP*GP*U)-3'), RNA (5'-R(*AP*UP*GP*AP*CP*GP*GP*CP*UP*CP*UP*AP*AP*UP*CP*UP*AP*UP*UP*AP*GP*U)-3'), DNA (5'-D(*AP*CP*TP*AP*AP*TP*AP*GP*AP*TP*TP*AP*GP*AP*GP*CP*CP*GP*TP*C)-3'), DNA (5'-D(*AP*CP*TP*AP*AP*TP*AP*GP*AP*TP*TP*AP*GP*AP*GP*CP*CP*GP*TP*C)-3'), DNA (5'-D(*AP*CP*TP*AP*AP*TP*AP*GP*AP*TP*TP*AP*GP*AP*GP*CP*CP*GP*TP*C)-3'), DNA (5'-D(*AP*CP*TP*AP*AP*TP*AP*GP*AP*TP*TP*AP*GP*AP*GP*CP*CP*GP*TP*C)-3')
- Other compounds
Toll/interleukin-1 receptor domain-containing protein, Short prokaryotic Argonaute, Toll/interleukin-1 receptor domain-containing protein, Short prokaryotic Argonaute, Toll/interleukin-1 receptor domain-containing protein, Short prokaryotic Argonaute, Toll/interleukin-1 receptor domain-containing protein, Short prokaryotic Argonaute
Pairwise Interactions
Interactions annotated by
FR3D:
View all
RNA 3D Motifs
In the current release of the
RNA 3D Motif Atlas, 8QLP contains:
-
0 hairpin loops from 0 motif groups
-
12 internal loops from 0 motif groups
-
0 junction loops from 0 motif groups
More
3D Redundancy
This PDB is not included in any representative set equivalence class. Possibly, this PDB doesn't contain any complete nucleotides.
Similar structures
None found
