- Structure title
- Cryo-EM structure of the cross-exon pre-B+AMPPNP complex
- Authors
- Zhang, Z., Kumar, V., Dybkov, O., Will, C.L., Zhong, J., Ludwig, S., Urlaub, H., Kastner, B., Stark, H., Luehrmann, R.
- Release date
- 2024-05-22
- Experimental technique
- ELECTRON MICROSCOPY
- Resolution
- 6.1 Å
- Chains
-
7 RNA chains from
Homo sapiens
-
64 other chains
- Nucleic acid compounds
U1 snRNA, U2 snRNA, U4 snRNA, U5 snRNA, U6 snRNA, pre-mRNA, oligo 1
- Other compounds
Small nuclear ribonucleoprotein Sm D1, Small nuclear ribonucleoprotein Sm D2, Small nuclear ribonucleoprotein Sm D3, U1 small nuclear ribonucleoprotein 70 kDa, Small nuclear ribonucleoprotein-associated proteins B and B', Small nuclear ribonucleoprotein E, Small nuclear ribonucleoprotein F, Small nuclear ribonucleoprotein G, Small nuclear ribonucleoprotein Sm D1, Small nuclear ribonucleoprotein Sm D2, Small nuclear ribonucleoprotein Sm D3, U2 small nuclear ribonucleoprotein A', U2 small nuclear ribonucleoprotein B'', Small nuclear ribonucleoprotein-associated proteins B and B', Small nuclear ribonucleoprotein E, Small nuclear ribonucleoprotein F, Small nuclear ribonucleoprotein G, Small nuclear ribonucleoprotein Sm D1, Small nuclear ribonucleoprotein Sm D2, Small nuclear ribonucleoprotein Sm D3, U4/U6 small nuclear ribonucleoprotein Prp4, Small nuclear ribonucleoprotein-associated proteins B and B', Small nuclear ribonucleoprotein E, Small nuclear ribonucleoprotein F, Small nuclear ribonucleoprotein G, Small nuclear ribonucleoprotein Sm D1, Small nuclear ribonucleoprotein Sm D2, Small nuclear ribonucleoprotein Sm D3, Small nuclear ribonucleoprotein-associated proteins B and B', Small nuclear ribonucleoprotein E, Small nuclear ribonucleoprotein F, Small nuclear ribonucleoprotein G, U6 snRNA-associated Sm-like protein LSm2, U6 snRNA-associated Sm-like protein LSm3, U6 snRNA-associated Sm-like protein LSm4, U6 snRNA-associated Sm-like protein LSm5, U6 snRNA-associated Sm-like protein LSm6, U6 snRNA-associated Sm-like protein LSm7, U6 snRNA-associated Sm-like protein LSm8, Splicing factor 3A subunit 1, Splicing factor 3A subunit 2, Splicing factor 3A subunit 3, Pre-mRNA-processing-splicing factor 8, U5 small nuclear ribonucleoprotein 200 kDa helicase, Splicing factor 3B subunit 1, Splicing factor 3B subunit 2, Splicing factor 3B subunit 3, Splicing factor 3B subunit 4, Splicing factor 3B subunit 5, Splicing factor 3B subunit 6, PHD finger-like domain-containing protein 5A, 116 kDa U5 small nuclear ribonucleoprotein component, Thioredoxin-like protein 4A, U5 small nuclear ribonucleoprotein 40 kDa protein, Probable ATP-dependent RNA helicase DDX23, U4/U6 small nuclear ribonucleoprotein Prp3, Serine/threonine-protein kinase PRP4 homolog, U4/U6 small nuclear ribonucleoprotein Prp31, NHP2-like protein 1, N-terminally processed, Pre-mRNA-processing factor 6, RNA-binding protein 42, U4/U6.U5 tri-snRNP-associated protein 1, Ubiquitin carboxyl-terminal hydrolase 39, U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein
Pairwise Interactions
Interactions annotated by
FR3D:
View all
RNA 3D Motifs
In the current release of the
RNA 3D Motif Atlas, 8R08 contains:
-
9 hairpin loops from 0 motif groups
-
29 internal loops from 0 motif groups
-
3 junction loops from 0 motif groups
More
3D Redundancy
8R08 has chains which belong to the following equivalence classes in the current representative set:
Similar structures
None found
