8W51 Summary
- Structure title
- Structure of YchF(H114A) on E.coli 50S ribosomal subunit
- Authors
- Yu, T., Li, X., Zeng, F.
- Release date
- 2024-08-28
- Experimental technique
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
- Chains
- 2 RNA chains from Escherichia coli
- 30 other chains
- Nucleic acid compounds
- Other compounds
- 23S rRNA, 5S rRNA
- 50S ribosomal protein L30, 50S ribosomal protein L32, 50S ribosomal protein L33, 50S ribosomal protein L34, 50S ribosomal protein L35, 50S ribosomal protein L36, 50S ribosomal protein L2, 50S ribosomal protein L3, 50S ribosomal protein L4, 50S ribosomal protein L5, 50S ribosomal protein L6, 50S ribosomal protein L9, Large ribosomal subunit protein uL11, 50S ribosomal protein L13, 50S ribosomal protein L14, 50S ribosomal protein L15, 50S ribosomal protein L16, 50S ribosomal protein L17, 50S ribosomal protein L18, 50S ribosomal protein L19, 50S ribosomal protein L20, 50S ribosomal protein L21, 50S ribosomal protein L22, 50S ribosomal protein L23, 50S ribosomal protein L24, 50S ribosomal protein L25, 50S ribosomal protein L27, 50S ribosomal protein L28, 50S ribosomal protein L29, Ribosome-binding ATPase YchF
Pairwise Interactions
Interactions annotated by FR3D:- 1,329 base-pairs
- 3,211 base-stacking
- 78 base-phosphate
- 97 base-ribose
RNA 3D Motifs
In the current release of the RNA 3D Motif Atlas, 8W51 contains:- 74 hairpin loops from 0 motif groups
- 129 internal loops from 0 motif groups
- 40 junction loops from 0 motif groups
3D Redundancy
8W51 has chains which belong to the following equivalence classes in the current representative set:- NR_all_10157.157 (1)
- NR_all_83717.159 (1)
- NR_4.0_10157.157 (1)
- NR_4.0_83717.159 (1)
- NR_3.5_10157.157 (1)
- NR_3.5_83717.159 (1)
- NR_3.0_10157.157 (1)
- NR_3.0_83717.159 (1)
- NR_20.0_10157.157 (1)
- NR_20.0_83717.159 (1)
- NR_2.5_10157.157 (1)
- NR_2.5_83717.159 (1)
Similar structures
5J7L 5J8A 5JC9 4YBB 5IT8 4WOI 4WOI 5J91 6I7V 4V9P 5J88 4V9P 4V9P 4V9P 6LKQ 4V9D 4V9O 4V9O 4WWW 4V9O 5J7L 4V6C 4V7T 4U27 5J8A 4WF1 5JC9 4V7U 4V7V 4V52 4U24 4U25 4V9D 4U26 4V7S 4V57 4V52 4V57 4V9O 4U1U 4V85 4V54 4V64 4V50 4V54 4V64 6BY1 4V53 4V50 4YBB 4U1V 5J88 4V53 4V9C 4V56 4U20 4V56 6I7V 6BY1 4U27 4V55 4V4Q 4V55 4V4Q 4V6D 4U25 4U1U 4V9C 4U1V 4V89 5IT8 4V6E 4WF1 4U24 4U26 5J91 4U20 4V6C 4V5Y 4WWW 4V7T 4V5Y 4V6D 4V7V 4V7S 4V7U 4V6E 4V5B 4V5B 5J5B 4V4H 4V4H 5J5B 9Q87 6HRM 8B0X 8CGK 8CGV 8CEU 8FTO 9GHE 8E30 8CAM 8AYE 8E3O 9D89 7K00 8CGD 8E49 8QOA 8G6W 7QQ3 8E43 8BIM 7ZP8 8BIL 8G6Y 8E41 8EMM 6XZ7 8ANA 8QBT 7LVK 8BGE 6PJ6 7Z20 9GHB 9N2B 8E35 7N1P 8E48 8R6C 8E33 9GHA 7PJS 7S1H 8E3M 8BHL 8E47 8E45 8EIU 8E42 8YUO 8E46 8E32 7S1K 8E3L 7O1A 8AKN 8RQ2 8RQ0 8RPZ 8G6X 8HSP 8BF7 7S1J 7Y7G 7S1I 7S1G 8E36 9GHF 9GHD 8YUP 7N2U 9N2C 9FBV 8HTZ 8BHP 7N2V 7YLA 7BL4 7Y7E 8YUQ 8R8M 7SA4 7ZOD 8IFB 7Y7F 8YUS 7UG7 6YS3 6YSS 8YUR 6PCR 6PC6 6PC7 9AX8 7Y7C 7Y7H 9MOR 8E44 7NWT 7N30 6XZB 9H0L 7N31 7O1C 7ZTA 7ZQ5 6TBV 6TC3 7Y7D 9CG5 7N2C 9CG6 6PCQ 8RPY 8BH4 7ZQ6 8EKC 9GXX 9AX7 8ZEJ 8P16 8P18 8QK7 9MQ4 8P17 6XZA 7M5D 7UPH 8G7R 8HU1 6QDW 6PC5 9IOT 9CG7 9GHC 7OTC 7NSO 7OT5 7ST2 8FZH 8G7P 7B5K 8AM9 6WYV 6U48 8BHJ 6PCT 8J1Z 8SYL 6PCS 7O19 6Y69 5AFI 7OII 7OIF 7ST6 7TOS 8FZE 8FZJ 8B7Y 6WNT 8BGH 5NWY 6WD0 6WDE 7OIZ 7P3K 8IFC 8ZTV 8ZTU 8BHN 8ZFI 7Q4K 5H5U 7NWW 6ORE 5MDV 6PC8 8G2U 7AC7 6H4N 8UXB 6ZTP 6ZU1 6ZTO 8PKL 6PCH 7NSQ 6YSR 6OM6 7PJY 7PJV 8FZI 8FZG 8G7S 8FZD 8G7Q 6WNW 9GFT 9GFT 7NBU 8URY 6X7K 9NL5 8AP4 5MDW 6SZS 5MGP 5MDZ 7OIG 7K54 7K53 6YST 7SSN 7LV0 7SSO 7ST7 7ACJ 8G34 8G38 9NLH 8FZF 9GGR 9GGR 6S0K 7ABZ 5U9G 5U9F 6WDD 5UYM 6ENU 8UQL 6X6T 8URM 6QUL 6VWL 8Q4F 5WFS 9NLJ 8R3V 9H3Z 8T5D 7BL5 9NJV 5WE4 8PEG 7K55 7JT1 8T5H 7SSD 7CPJ 6WDG 8G31 9GR1 6WDF 6WD1 6OG7 9NL6 6OFX 9NLF 3JBV 6C4I 9NLE 9NLB 5WDT 7QGN 7BV8 9HA6 9H3Y 6ENF 7K50 7K52 6WNV 6OGI 8A3L 8UR0 9NLQ 9NL7 5GAE 9NLS 7ACR 3JCE 5LZD 5MDY 6ZTM 7D6Z 5WE6 8RCL 6I0Y 7NSP 7JT2 7K51 9NKL 6X7F 5WFK 6BU8 5LZE 9MKK 5O2R 6ZTJ 8VV4 8C8Y 7OJ0 5U4I 8RCM 5IQR 6VWN 6VWM 5UYL 6WD2 6WDK 6WD5 6WDM 6WD3 9NJF 6OSQ 8VKV 3JBU 5LZA 5KCR 5JU8 5JTE 7JT3 6YSU 7JSZ 7JSS 6WDJ 6WD4 6WD8 6WD6 8PHJ 7BL3 6WD9 6WDL 6ORL 6OSK 8VOR 6XDQ 6VYS 8VUP 3J9Z 6DNC 5WF0 3JCJ 7ODE 8UZ3 7JSW 7SSL 7SSW 5UYQ 6WDA 8UTJ 8VOO 8UQP 6Q9A 6ENJ 5L3P 5GAD 8UX8 6GC8 6ZTL 5UYP 7SS9 5UYK 6OGF 6OUO 6WD7 8VSA 7BL2 6GWT 5KPW 6GXM 5GAG 5GAH 6GBZ 7QG8 5KPS 3J9Y 5UYN 7PJW 6WDI 6WDB 6GC0 6GXO 8C8Z 8UZG 6GXN 6O9K 6O9J 5KPX 3JCD 5KCS 9H3U 4UY8 7D80 6OT3 6Q97 8VS9 8FIZ 6ZTN 8C90 9H3V 9HAI 6OGG 6WDC 7BL6 3J7Z 5NP6 6WDH 5KPV 9HA5 8CGJ 8V03 8C8X 8RCS 5GAF 8CGU 7QGH 6GXP 6Q98 3JA1 9H3S 6OST 3JCN 8VOS 8CEP 9H3Q 8PVA 6GC4 5LZF 8CGR 6XDR 9H3T 9H3X 8KIE 9HA3 6X9Q 9H3R 9H3N 5LZC 5NCO 8C92 6XGF 6GC6 9HA2 8C91 8C94 6C4H 6GC7 8C99 8RCT 8URI 8UQM 9HA4 9HA1 5LZB 8C93 9HA7 9H3O 9H3M 8C98 7QGR 8URH 8VL1 4CSU 8C97 8R3V 4V5H 9H3W 8C96 7PJZ 7PJT 8VOP 8RCL 8RCM 9HAL 9HAM 5U4J 3J8G 9CL9 7PJX 8URX 8C95 4V69 5AKA 9H3L 6XII 8RCS 4V6M 4V7B 5ADY 8C9A 3J5L 4V7C 4V7D 9H3P 8RCT 6H58 6H58 5ZZM 4V6K 9H3K 8C9B 6VZ5 4V7A 4V65 4V66 2RDO 8C9C 4V6T 8VOQ 7PJU 2J28 4V6V 6VYZ 6VZ2 3DG2 3DG0 4V6R 4V6Q 4V7I 4V48 4V75 4V6Z 4V6Y 4V6N 3BBX 4V47 3DG4 4V72 4V6S 4V6L 4V6P 4V6O 4V73 4V79 3DG5 4V4W 4V4V 4V76 4V70 4V74 4V77 4V78 4V71Structures from NR_all_83717.159