8WHX Summary
- Structure title
- Cryo- EM structure of Mycobacterium smegmatis 70S ribosome and RafH.
- Authors
- Kumar, N., Sharma, S., Kaushal, P.S.
- Release date
- 2024-02-28
- Experimental technique
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
- Chains
- 3 RNA chains from Mycolicibacterium smegmatis MC2 155
- 47 other chains
- Nucleic acid compounds
- Other compounds
- 23S rRNA, 5S rRNA, 16S rRNA
- 50S ribosomal protein L28, 50S ribosomal protein L29, 50S ribosomal protein L30, 50S ribosomal protein L31, 50S ribosomal protein L32, 50S ribosomal protein L33A, 50S ribosomal protein L34, 50S ribosomal protein L35, 50S ribosomal protein L2, 50S ribosomal protein L3, 50S ribosomal protein L4, 50S ribosomal protein L5, 50S ribosomal protein L6, 50S ribosomal protein L9, 50S ribosomal protein L13, 50S ribosomal protein L14, 50S ribosomal protein L15, 50S ribosomal protein L17, 50S ribosomal protein L18, 50S ribosomal protein L19, 50S ribosomal protein L20, 50S ribosomal protein L21, 50S ribosomal protein L22, 50S ribosomal protein L23, 50S ribosomal protein L24, 50S ribosomal protein L27, 30S ribosomal protein S2, 30S ribosomal protein S3, 30S ribosomal protein S4, 30S ribosomal protein S5, 30S ribosomal protein S6, 30S ribosomal protein S7, 30S ribosomal protein S8, 30S ribosomal protein S9, 30S ribosomal protein S10, 30S ribosomal protein S11, 30S ribosomal protein S12, 30S ribosomal protein S13, 30S ribosomal protein S14A, 30S ribosomal protein S15, 30S ribosomal protein S16, 30S ribosomal protein S17, 30S ribosomal protein S18B, 30S ribosomal protein S19, 30S ribosomal protein S20, 30S ribosomal protein S22, Ribosome hibernation promotion factor RafH
Pairwise Interactions
Interactions annotated by FR3D:- 1,928 base-pairs
- 4,885 base-stacking
- 98 base-phosphate
- 141 base-ribose
RNA 3D Motifs
In the current release of the RNA 3D Motif Atlas, 8WHX contains:- 109 hairpin loops from 0 motif groups
- 205 internal loops from 0 motif groups
- 68 junction loops from 0 motif groups
3D Redundancy
8WHX has chains which belong to the following equivalence classes in the current representative set:- NR_all_97539.13 (1)
- NR_all_76090.15 (1)
- NR_all_89181.10 (1)
- NR_4.0_97539.13 (1)
- NR_4.0_76090.15 (1)
- NR_4.0_89181.10 (1)
- NR_3.5_97539.13 (1)
- NR_3.5_76090.15 (1)
- NR_3.5_89181.10 (1)
- NR_3.0_97539.13 (1)
- NR_3.0_76090.15 (1)
- NR_3.0_89181.10 (1)
- NR_20.0_97539.13 (1)
- NR_20.0_76090.15 (1)
- NR_20.0_89181.10 (1)