8WIC Summary
- Structure title
- Cryo- EM structure of Mycobacterium smegmatis 50S ribosomal subunit (body 1) of 70S ribosome, E- tRNA and RafH.
- Authors
- Kumar, N., Sharma, S., Kaushal, P.S.
- Release date
- 2024-02-28
- Experimental technique
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
- Chains
- 3 RNA chains from Mycolicibacterium smegmatis MC2 155
- 26 other chains
- Nucleic acid compounds
- Other compounds
- 23S rRNA, 5S rRNA, E-tRNA
- 50S ribosomal protein L28, 50S ribosomal protein L29, 50S ribosomal protein L30, 50S ribosomal protein L31, 50S ribosomal protein L32, 50S ribosomal protein L33A, 50S ribosomal protein L34, 50S ribosomal protein L35, 50S ribosomal protein L2, 50S ribosomal protein L3, 50S ribosomal protein L4, 50S ribosomal protein L5, 50S ribosomal protein L6, 50S ribosomal protein L9, 50S ribosomal protein L13, 50S ribosomal protein L14, 50S ribosomal protein L15, 50S ribosomal protein L17, 50S ribosomal protein L18, 50S ribosomal protein L19, 50S ribosomal protein L20, 50S ribosomal protein L21, 50S ribosomal protein L22, 50S ribosomal protein L23, 50S ribosomal protein L24, 50S ribosomal protein L27
Pairwise Interactions
Interactions annotated by FR3D:- 1,305 base-pairs
- 3,324 base-stacking
- 66 base-phosphate
- 92 base-ribose
RNA 3D Motifs
In the current release of the RNA 3D Motif Atlas, 8WIC contains:- 79 hairpin loops from 0 motif groups
- 134 internal loops from 0 motif groups
- 44 junction loops from 0 motif groups
3D Redundancy
8WIC has chains which belong to the following equivalence classes in the current representative set:- NR_all_98029.3 (1)
- NR_all_76090.15 (1)
- NR_all_89181.10 (1)
- NR_4.0_98029.3 (1)
- NR_4.0_76090.15 (1)
- NR_4.0_89181.10 (1)
- NR_3.5_98029.3 (1)
- NR_3.5_76090.15 (1)
- NR_3.5_89181.10 (1)
- NR_20.0_98029.3 (1)
- NR_20.0_76090.15 (1)
- NR_20.0_89181.10 (1)