9GHG Summary
- Structure title
- Staphylococcus aureus FusB bound to the small subunit of the S. aureus 70S ribosome (FusB-Sa70S:SSU)
- Authors
- Gonzalez-Lopez, A., Selmer, M.
- Release date
- 2025-03-26
- Experimental technique
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
- Chains
- 6 RNA chains from Staphylococcus aureus subsp. aureus NCTC 8325, Escherichia coli K-12
- 49 other chains
- Nucleic acid compounds
- Other compounds
- 23S rRNA, 5S rRNA, E-site tRNA, E-site tRNA, 23S rRNA, mRNA
- 50S ribosomal protein L28, 50S ribosomal protein L29, 50S ribosomal protein L30, 50S ribosomal protein L31 type B, Large ribosomal subunit protein bL32, Large ribosomal subunit protein bL33A, 50S ribosomal protein L34, 50S ribosomal protein L35, 50S ribosomal protein L36, Far1, 50S ribosomal protein L2, 50S ribosomal protein L3, 50S ribosomal protein L4, 50S ribosomal protein L5, 50S ribosomal protein L6, 50S ribosomal protein L13, 50S ribosomal protein L14, 50S ribosomal protein L15, 50S ribosomal protein L16, 50S ribosomal protein L17, 50S ribosomal protein L18, 50S ribosomal protein L19, 50S ribosomal protein L20, 50S ribosomal protein L21, 50S ribosomal protein L22, 50S ribosomal protein L23, 50S ribosomal protein L24, 50S ribosomal protein L25, 50S ribosomal protein L27, 30S ribosomal protein S2, 30S ribosomal protein S3, 30S ribosomal protein S4, 30S ribosomal protein S5, 30S ribosomal protein S6, 30S ribosomal protein S7, 30S ribosomal protein S8, 30S ribosomal protein S9, Small ribosomal subunit protein uS10, 30S ribosomal protein S11, 30S ribosomal protein S12, 30S ribosomal protein S13, 30S ribosomal protein S14 type Z, 30S ribosomal protein S15, 30S ribosomal protein S16, 30S ribosomal protein S17, 30S ribosomal protein S18, 30S ribosomal protein S19, 30S ribosomal protein S20, 30S ribosomal protein S21
Pairwise Interactions
Interactions annotated by FR3D:- 2,044 base-pairs
- 5,007 base-stacking
- 604 base-phosphate
- 631 base-ribose
- 254 oxygen stacking
- 244 sugar-ribose
RNA 3D Motifs
In the current release of the RNA 3D Motif Atlas, 9GHG contains:- 108 hairpin loops from 0 motif groups
- 178 internal loops from 0 motif groups
- 65 junction loops from 0 motif groups
3D Redundancy
9GHG has chains which belong to the following equivalence classes in the current representative set:- NR_all_35542.162 (2)
- NR_all_90633.29 (1)
- NR_all_83891.28 (1)
- NR_all_74023.19 (1) rep
- NR_4.0_35542.162 (2)
- NR_4.0_90633.29 (1)
- NR_4.0_83891.28 (1)
- NR_4.0_74023.19 (1) rep
- NR_3.5_35542.162 (2)
- NR_3.5_90633.29 (1)
- NR_3.5_83891.28 (1)
- NR_3.5_74023.19 (1) rep
- NR_3.0_35542.162 (2)
- NR_3.0_90633.29 (1)
- NR_3.0_83891.28 (1)
- NR_3.0_74023.19 (1) rep
- NR_20.0_35542.162 (2)
- NR_20.0_90633.29 (1)
- NR_20.0_83891.28 (1)
- NR_20.0_74023.19 (1) rep
- NR_2.5_35542.162 (2)
- NR_2.5_90633.29 (1)
- NR_2.5_83891.28 (1)
- NR_2.5_74023.19 (1) rep
Similar structures
9QEH 9QEG 9T4R 7ASM 9GHH 6WQN 7TTW 6WRU 6S0Z 6WQQ 9I88 9I89 7ASP 6WRS 6DDG 7NHM 4WF9 5NGM 5HL7 6DDD 7NHL 7ASO 4WFA 5T7V 4WFB 5HKV 4WCE 7TTU 6S0X 5NRG 6SJ6 5ND8 5TCU 5ND9 6S12 7ASN 5LI0 6FXC 6FXC 7P48 6S13 8P2G 8P2F 8P2H 8Y38 8Y37 6HMA 8Y36 6YEF 8Y39Structures from NR_all_90633.29