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9HQV Summary

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Circular diagram PDF
Structure title
Cryo-EM structure of the small subunit of the mitochondrial ribosome from Toxoplasma gondii
Authors
Tobiasson, V., Shikha, S., Muhleip, A.
Release date
2025-06-11
Experimental technique
ELECTRON MICROSCOPY
Resolution
2.5 Å
Chains
23 RNA chains from Toxoplasma gondii
65 other chains
Nucleic acid compounds
SSU-1, SSU-2, SSU-3, SSU-4, SSU-5, SSU-6, SSU-7, SSU-8, SSU-9, SSU-10, SSU-11, SSU-12, SSU-13, SSU-14, SSU-15, SSU-16, SSU-17, SSU-18, SSU-19, SSU-20, SSU-21, tRNA E-site, Chain UC
Other compounds
Enoyl-CoA hydratase/isomerase family protein, mS75, Pentatricopeptide repeat domain-containing protein, mS92, Ribosomal protein, uS2m, Putative 30S ribosomal protein S5, Putative mitochondrial ribosomal protein s6-2, Putative ribosomal protein S8, Putative ribosomal protein S9, uS10m, Putative ribosomal protein S11, Putative 30S ribosomal protein S12, us13m, Putative ribosomal protein S14, Putative 30S ribosomal protein S15, Putative 30S ribosomal protein S16, Putative ribosomal protein S17, Putative ribosomal protein S18, Ribosomal protein, bS21m, mS23, Mitochondrial ribosomal protein, mS26, Small ribosomal subunit protein mS29, DNA double-strand break repair rad50 ATPase, mS34, Small ribosomal subunit protein mS35 mitochondrial conserved domain-containing protein, CHCH domain-containing protein, Mitochondrial mRNA-processing protein COX24 C-terminal domain-containing protein, Homeodomain-like containing protein, mS45, UNK1, UNK2, UNK3, UNK4, Chain Uh, Unknown peptide, Chain Uj, Unknown peptide, GLY-ARG-SER-LYS-VAL-LEU-ILE-ARG-ARG-LEU-LYS-GLU-ARG-ALA-LYS-LYS-GLU-ALA-GLU-LYS-LYS-ALA, ARG-ALA-GLU-LEU-VAL-ALA-ALA-GLN-VAL-ARG-GLU-LYS-LEU-ALA-ILE-LYS-MET-ALA-ASN-ALA-LEU-ALA, Chain Un, chain Uo, chain Up, chain Uq, mS117, ATP-dependent Clp protease proteolytic subunit,related protein, mS119, mS120, mS121, Macro domain-containing protein, Thioredoxin domain-containing protein, mS124, mS125, DnaJ domain-containing protein, RAP domain-containing protein, mS128, RAP domain-containing protein, AP2 domain transcription factor AP2IX-6, mS131, mS132, mS133, Acylphosphatase-like domain-containing protein, mS135, mS136, mS137, mS138

Pairwise Interactions

Interactions annotated by FR3D: View all

RNA 3D Motifs

In the current release of the RNA 3D Motif Atlas, 9HQV contains:
  • 15 hairpin loops from 0 motif groups
  • 35 internal loops from 0 motif groups
  • 4 junction loops from 0 motif groups
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3D Redundancy

9HQV has chains which belong to the following equivalence classes in the current representative set:

Similar structures

9FIA
Structures from NR_all_76884.1
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