- Structure title
- Principles of ion binding to RNA inferred from the analysis of a 1.55 Angstrom resolution bacterial ribosome structure - Part I: Mg2+
- Authors
- Leonarski, f., Henning-Knechtel, A., Kirmizialtin, S., Ennifar, E., Auffinger, P.
- Release date
- 2025-05-14
- Experimental technique
- ELECTRON MICROSCOPY
- Resolution
- 1.6 Å
- Chains
-
6 RNA chains from
Escherichia coli B
-
49 other chains
- Nucleic acid compounds
A-site tRNA, 16S rRNA, mRNA, P-site tRNA, 23S rRNA, 5S rRNA
- Other compounds
Large ribosomal subunit protein bL33, Large ribosomal subunit protein bL34, Large ribosomal subunit protein bL35, Large ribosomal subunit protein bL36, Large ribosomal subunit protein uL11, Small ribosomal subunit protein uS2, Small ribosomal subunit protein uS3, Small ribosomal subunit protein uS4, Small ribosomal subunit protein uS5, Small ribosomal subunit protein bS6, fully modified isoform, Small ribosomal subunit protein uS7, Small ribosomal subunit protein uS8, Small ribosomal subunit protein uS9, Small ribosomal subunit protein uS10, Small ribosomal subunit protein uS11, Small ribosomal subunit protein uS12, Small ribosomal subunit protein uS13, Small ribosomal subunit protein uS14, Small ribosomal subunit protein uS15, Small ribosomal subunit protein bS16, Small ribosomal subunit protein uS17, Small ribosomal subunit protein bS18, Small ribosomal subunit protein uS19, Small ribosomal subunit protein bS20, Small ribosomal subunit protein bS21, Large ribosomal subunit protein uL2, Large ribosomal subunit protein uL3, Large ribosomal subunit protein uL4, Large ribosomal subunit protein uL5, Large ribosomal subunit protein uL6, Large ribosomal subunit protein bL9, Large ribosomal subunit protein uL13, Large ribosomal subunit protein uL14, Large ribosomal subunit protein uL15, Large ribosomal subunit protein uL16, Large ribosomal subunit protein bL17, Large ribosomal subunit protein uL18, Large ribosomal subunit protein bL19, Large ribosomal subunit protein bL20, Large ribosomal subunit protein bL21, Large ribosomal subunit protein uL22, Large ribosomal subunit protein uL23, Large ribosomal subunit protein uL24, Large ribosomal subunit protein bL25, Large ribosomal subunit protein bL27, Large ribosomal subunit protein bL28, Large ribosomal subunit protein uL29, Large ribosomal subunit protein uL30, Large ribosomal subunit protein bL32
Pairwise Interactions
Interactions annotated by
FR3D:
View all
RNA 3D Motifs
In the current release of the
RNA 3D Motif Atlas, 9Q87 contains:
-
107 hairpin loops from 0 motif groups
-
184 internal loops from 0 motif groups
-
65 junction loops from 0 motif groups
More
3D Redundancy
9Q87 has chains which belong to the following equivalence classes in the current representative set:
Similar structures
None found
