9RUC Summary
- Structure title
- WT-HEK 80S ribosome bound to H2B mRNA (WT-H2B)
- Authors
- Hiregange, D.G., Fraticelli, D., Bashan, A., Yonath, A., Dikstein, R.
- Release date
- 2026-05-13
- Experimental technique
- ELECTRON MICROSCOPY
- Resolution
- 2.5 Å
- Chains
- 7 RNA chains from Homo sapiens
- 73 other chains
- Nucleic acid compounds
- Other compounds
- 28S rRNA, 5S rRNA, 5.8S rRNA, P site tRNA, 18S rRNA, E site tRNA, Histone H2B mRNA
- Large ribosomal subunit protein uL2, Large ribosomal subunit protein uL3, 60S ribosomal protein L4, 60S ribosomal protein L5, Large ribosomal subunit protein eL6, Large ribosomal subunit protein uL30, 60S ribosomal protein L7a, Large ribosomal subunit protein uL6, Large ribosomal subunit protein uL16, 60S ribosomal protein L11, Large ribosomal subunit protein eL13, 60S ribosomal protein L14, 60S ribosomal protein L15, 60S ribosomal protein L13a, Large ribosomal subunit protein uL22, 60S ribosomal protein L18, 60S ribosomal protein L19, 60S ribosomal protein L18a, 60S ribosomal protein L21, 60S ribosomal protein L22, 60S ribosomal protein L23, 60S ribosomal protein L24, 60S ribosomal protein L23a, 60S ribosomal protein L26, 60S ribosomal protein L27, Large ribosomal subunit protein uL15, Large ribosomal subunit protein eL29, 60S ribosomal protein L30, 60S ribosomal protein L31, Large ribosomal subunit protein eL32, Large ribosomal subunit protein eL33, 60S ribosomal protein L34, 60S ribosomal protein L35, 60S ribosomal protein L36, Large ribosomal subunit protein eL37, 60S ribosomal protein L38, 60S ribosomal protein L39, Ubiquitin-ribosomal protein eL40 fusion protein, 60S ribosomal protein L41, Large ribosomal subunit protein eL42, 60S ribosomal protein L37a, Large ribosomal subunit protein eL28, Small ribosomal subunit protein uS2, 40S ribosomal protein S3a, 40S ribosomal protein S2, 40S ribosomal protein S3, Small ribosomal subunit protein eS4, X isoform, 40S ribosomal protein S5, 40S ribosomal protein S6, 40S ribosomal protein S7, 40S ribosomal protein S8, 40S ribosomal protein S9, 40S ribosomal protein S10, Small ribosomal subunit protein uS17, 40S ribosomal protein S13, 40S ribosomal protein S14, 40S ribosomal protein S15, 40S ribosomal protein S16, 40S ribosomal protein S17, 40S ribosomal protein S18, 40S ribosomal protein S19, 40S ribosomal protein S20, Small ribosomal subunit protein eS21, 40S ribosomal protein S15a, 40S ribosomal protein S23, 40S ribosomal protein S24, Small ribosomal subunit protein eS25, 40S ribosomal protein S26, 40S ribosomal protein S27, 40S ribosomal protein S28, 40S ribosomal protein S29, Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein, Small ribosomal subunit protein RACK1
Pairwise Interactions
Interactions annotated by FR3D:- 1,989 base-pairs
- 5,225 base-stacking
- 516 base-phosphate
- 559 base-ribose
- 204 oxygen stacking
- 378 sugar-ribose
RNA 3D Motifs
In the current release of the RNA 3D Motif Atlas, 9RUC contains:- 96 hairpin loops from 0 motif groups
- 228 internal loops from 0 motif groups
- 56 junction loops from 0 motif groups
3D Redundancy
9RUC has chains which belong to the following equivalence classes in the current representative set:- NR_all_90476.5 (1)
- NR_all_65061.56 (1)
- NR_all_52752.52 (1)
- NR_all_46995.65 (1)
- NR_all_46476.1 (1) rep
- NR_4.0_90476.5 (1)
- NR_4.0_65061.56 (1)
- NR_4.0_52752.52 (1)
- NR_4.0_46995.65 (1)
- NR_4.0_46476.1 (1) rep
- NR_3.5_90476.5 (1)
- NR_3.5_65061.56 (1)
- NR_3.5_52752.52 (1)
- NR_3.5_46995.65 (1)
- NR_3.5_46476.1 (1) rep
- NR_3.0_90476.5 (1)
- NR_3.0_65061.56 (1)
- NR_3.0_52752.52 (1)
- NR_3.0_46995.65 (1)
- NR_3.0_46476.1 (1) rep
- NR_20.0_90476.5 (1)
- NR_20.0_65061.56 (1)
- NR_20.0_52752.52 (1)
- NR_20.0_46995.65 (1)
- NR_20.0_46476.1 (1) rep
- NR_2.5_90476.5 (1)
- NR_2.5_65061.56 (1)
- NR_2.5_52752.52 (1)
- NR_2.5_46995.65 (1)
- NR_2.5_46476.1 (1) rep
Similar structures
8GLP 9O3W 8QYX 8YOO 8QFD 9SPI 9C3H 8A3D 9SPF 9O3V 9S3D 9I2D 9S3B 9S3C 9QLO 9PBE 8G5Y 9QLQ 8YOP 9O3Y 9P7D 8QOI 9P8B 8G5Z 8JDK 9P7E 8G60 9RPV 9GUL 6ZMI 9FQZ 8XSX 9QLP 8JDL 9P73 8JDJ 7F5S 8OJ5 8K2C 9P7O 9RPV 9P7Y 7XNY 9P7C 8FLE 9PA7 6ZM7 9P9J 9P7A 9P7X 9P9I 8JDM 7OW7 7XNX 6QZP 8IFD 8FLB 8FLD 8FL7 9P72 9P7K 9P76 9P9H 8OHD 9P78 6Y2L 8G61 9P7N 8IFE 6Y6X 9GMO 9P7W 6Z6M 6ZME 9P6Z 9I2E 7QVP 8FL2 6ZMO 9P7L 8FLA 9RU7 22TU 8FL6 9KZU 8FL3 8Y0X 8Y0W 9B0P 6LQM 9GY4 8IDT 9P9K 8G6J 6Y0G 9P8H 8INF 8FLF 9N9J 7QVP 8UKB 9I14 6OM0 8XSY 8OJ8 9G8M 8OJ0 6LSR 6OLE 6XA1 6LU8 8FKV 8FL9 8RL2 9P8C 9P79 8FKW 8XSZ 9KZX 9QIW 8IDY 7BHP 8FLC 9M0P 6Y57 8INE 6LSS 8FKY 8FKX 9B0Q 9PKG 8IPY 8INK 9B0S 9Y4G 9SYR 8FL4 9B0Q 4UG0 8IPD 9P7G 9P7F 8FKQ 8FKU 8FKS 8FKT 6OLI 8FKR 9B0S 8IE3 9P7I 9Y49 8ONY 9P7H 8FKP 8IR1 8IR3 6IP5 9P8I 9P7J 5T2C 6W6L 6OLG 8FKZ 6IP8 6OLF 5LKS 6OLZ 8FL0 7ZFW 6OM7 9GJ6 6IP6 4V6X 8IPX 5A8L 6SXO 9GJ5 6Z6N 6Z6L 5AJ0Structures from NR_all_65061.56