Motif HL_27353.2 Version HL_27353.2 of this group appears in releases 1.18 to 1.18
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 1-3 | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | ➜ | 4AQ7 | 1.0241 | 1 | B | tRNA | G | 47|||A | C | 47|||D | C | 47|||F | cWW | |
| 2 | ➜ | 3U5H | 0.6611 | 2 | 5 | 25S rRNA | C | 132 | U | 134 | G | 136 | cWW | |
| 3 | ➜ | 4CUV | 0.4261 | 2 | 1 | 25S RRNA | C | 132 | U | 134 | G | 136 | cWW | |
| 4 | ➜ | 1ZBH | 0.2476 | 3 | F | RNA (20-mer) | U | 11 | U | 14 | A | 16 | cWW | |
| 5 | ➜ | 4TV0 | 0.0000 | 3 | B | RNA (26-MER) | U | 13 | U | 16 | A | 18 | cWW | |
| 6 | ➜ | 4QI2 | 0.2519 | 2 | E | RNA (23-mer) | C | 10 | G | 12 | G | 14 | cWW | |
| 7 | ➜ | 4QIL | 0.2697 | 2 | C | RNA (19-mer) | C | 8 | G | 10 | G | 12 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CUGUG | 2 |
| UUUUCA | 2 |
| CUUCG | 2 |
| GCGC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UGU | 2 |
| UUUC | 2 |
| UUC | 2 |
| CG | 1 |
Release history
| Release | 1.18 |
|---|---|
| Date | 2014-10-09 |
| Status | Updated, 1 parent |
Parent motifs
| Parent motif | Common motif instances | Only in HL_27353.2 | Only in the parent motif |
|---|---|---|---|
| HL_27353.1 Compare | HL_4QIL_002, HL_4QI2_001, HL_1ZBH_001, HL_4AQ7_002, HL_4CUV_004, HL_3U5H_004 | HL_4TV0_001 | HL_4TUX_001 |
Children motifs
This motif has no children motifs.
Coloring options: