Motif IL_27756.1 Version IL_27756.1 of this group appears in releases 2.0 to 2.0
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | break | 9 | 10 | 11 | 12 | 13 | 1-13 | 5-7 | 7-10 | 8-9 | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | ➜ | 4V88 | 0.0000 | 4 | A5 | LSU rRNA | U | 3179 | C | 3181 | G | 3182 | A | 3183 | A | 3184 | U | 3185 | A | 3187 | G | 3188 | * | C | 3204 | G | 3205 | C | 3206 | G | 3208 | A | 3210 | cWW | cSS | cWW | cWW | |
| 2 | ➜ | 4V91 | 0.2650 | 4 | 1 | LSU rRNA | U | 3179 | C | 3181 | G | 3182 | A | 3183 | A | 3184 | U | 3185 | A | 3187 | G | 3188 | * | C | 3204 | G | 3205 | C | 3206 | G | 3208 | A | 3210 | cWW | cSS | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UACGAAUAAG*CGCUGAA | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| ACGAAUAA*GCUGA | 2 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2017-04-24 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
- Basepair signature
- cWW-L-R-R-L-L-cSS-L-cWW-cWW
- Heat map statistics
- Min 0.26 | Avg 0.13 | Max 0.26
Coloring options: