Motif IL_72899.1 Version IL_72899.1 of this group appears in releases 2.0 to 2.0
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | break | 3 | 4 | 1-4 | 2-3 | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | ➜ | 4V9F | 0.2314 | 2 | 0 | LSU rRNA | G | 1269 | U | 1270 | * | A | 1286 | C | 1289 | cWW | cWW | |
| 2 | ➜ | 5FDU | 0.1537 | 2 | 1A | LSU rRNA | G | 1955 | C | 1956 | * | G | 1986 | C | 1989 | cWW | cWW | |
| 3 | ➜ | 5AN9 | 0.0000 | 2 | N | LSU rRNA | G | 2542 | C | 2543 | * | G | 2573 | U | 2576 | cWW | cWW | |
| 4 | ➜ | 5AJ0 | 0.0928 | 2 | A2 | LSU rRNA | G | 3751 | C | 3752 | * | G | 3782 | U | 3785 | cWW | cWW | |
| 5 | ➜ | 4V8P | 0.1334 | 2 | F1 | LSU rRNA | G | 2271 | C | 2272 | * | G | 2302 | U | 2305 | cWW | cWW | |
| 6 | ➜ | 4V91 | 0.1431 | 2 | 1 | LSU rRNA | G | 2276 | C | 2277 | * | G | 2307 | U | 2310 | cWW | cWW | |
| 7 | ➜ | 4V88 | 0.1379 | 2 | A5 | LSU rRNA | G | 2276 | C | 2277 | * | G | 2307 | U | 2310 | cWW | cWW | |
| 8 | ➜ | 4V9F | 0.1567 | 2 | 0 | LSU rRNA | G | 1974 | C | 1975 | * | G | 2005 | U | 2008 | cWW | cWW | |
| 9 | ➜ | 5FDU | 0.5740 | 1 | 1A | LSU rRNA | G | 269 | C | 270 | * | G | 273 | C | 275 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GC*GCAU | 6 |
| GC*GUC | 1 |
| GC*GCAC | 1 |
| GU*AAUC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| *CA | 7 |
| *U | 1 |
| *AU | 1 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2017-04-24 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.
Coloring options: