Motif IL_74275.1 Version IL_74275.1 of this group appears in releases 2.0 to 2.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | break | 3 | 4 | 5 | 1-5 | 2-3 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_5AJ3_036 | 5AJ3 | 0.1148 | 2 | A | SSU rRNA | C | 843 | G | 845 | * | C | 927 | A | 928 | G | 930 | cWW | cWW |
| 2 | IL_3J9W_052 | 3J9W | 0.1029 | 2 | AA | SSU rRNA | C | 1408 | G | 1410 | * | C | 1511 | A | 1512 | G | 1514 | cWW | cWW |
| 3 | IL_5A2Q_079 | 5A2Q | 0.0779 | 2 | 2 | SSU rRNA | C | 1700 | G | 1702 | * | C | 1833 | A | 1834 | G | 1836 | cWW | cWW |
| 4 | IL_4V88_463 | 4V88 | 0.0774 | 2 | A6 | SSU rRNA | C | 1636 | G | 1638 | * | C | 1764 | A | 1765 | G | 1767 | cWW | cWW |
| 5 | IL_3JAM_075 | 3JAM | 0.0000 | 2 | 2 | SSU rRNA | C | 1634 | G | 1636 | * | C | 1762 | A | 1763 | G | 1765 | cWW | cWW |
| 6 | IL_4V4Q_237 | 4V4Q | 0.0761 | 2 | CA | SSU rRNA | C | 1399 | G | 1401 | * | C | 1501 | A | 1502 | G | 1504 | cWW | cWW |
| 7 | IL_3J7A_070 | 3J7A | 0.0779 | 2 | A | SSU rRNA | C | 1933 | G | 1935 | * | C | 2056 | A | 2057 | G | 2059 | cWW | cWW |
| 8 | IL_3J9M_099 | 3J9M | 0.1106 | 2 | AA | SSU rRNA | C | 1483 | G | 1485 | * | C | 1566 | A | 1567 | G | 1569 | cWW | cWW |
| 9 | IL_4BTS_339 | 4BTS | 0.1220 | 2 | DA | SSU rRNA | C | 1608 | G | 1610 | * | C | 1717 | A | 1718 | G | 1720 | cWW | cWW |
| 10 | IL_1FJG_054 | 1FJG | 0.6252 | 2 | A | SSU rRNA | C | 1399 | G | 1401 | * | C | 1501 | A | 1502 | G | 1504 | cWW | cWW |
| 11 | IL_3J7P_225 | 3J7P | 0.6202 | 2 | S2 | SSU rRNA | C | 1700 | G | 1702 | * | C | 1833 | A | 1834 | G | 1836 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CCG*CAAG | 10 |
| CCG*CAUG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| C*AA | 10 |
| C*AU | 1 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2017-04-24 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (11)
- Basepair signature
- cWW-R-cWW
- Heat map statistics
- Min 0.08 | Avg 0.26 | Max 0.64
Coloring options: