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Equivalence class NR_2.0_56726.107 Obsolete

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
18B0X|1|A (rep)Small subunit ribosomal RNA16S rRNAEscherichia coli BBacteriaRF00177Translating 70S ribosome in the unrotated state (P and E, tRNAs)Electron microscopy1.552022-11-30
28FTO|1|ASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177E. coli 70S ribosome with an improved MS2 tag inserted in H98Electron microscopy1.852023-08-02
38AYE|1|ASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177E. coli 70S ribosome bound to thermorubin and fMet-tRNAElectron microscopy1.962023-03-01
47K00|1|ASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of the Bacterial Ribosome at 2 Angstrom ResolutionElectron microscopy1.982020-09-23
58CGJ|1|ASmall subunit ribosomal RNA16S rRNAEscherichia coli BW25113BacteriaRF00177Streptomycin bound to the 30S bodyElectron microscopy1.792023-07-26
68CGU|1|ASmall subunit ribosomal RNA16S rRNAEscherichia coli BW25113BacteriaRF00177Gentamicin bound to the 30S bodyElectron microscopy1.892023-07-26
78CF1|1|ASmall subunit ribosomal RNA16S rRNAEscherichia coli BW25113BacteriaRF00177Tetracycline bound to the 30S headElectron microscopy1.822023-07-26
88CGI|1|ASmall subunit ribosomal RNA16S rRNAEscherichia coli BW25113BacteriaRF00177Pentacycline TP038 bound to the 30S headElectron microscopy1.892023-07-26

Release history

Release3.2993.3003.3013.3023.3033.3043.305
Date2023-09-062023-09-132023-09-202023-09-272023-10-042023-10-112023-10-18

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_2.0_56726.107NR_2.0_56726.1063.299(8) 7K00|1|A, 8AYE|1|A, 8B0X|1|A, 8CF1|1|A, 8CGI|1|A, 8CGJ|1|A, 8CGU|1|A, 8FTO|1|A(0) (0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_2.0_56726.107NR_2.0_56726.1083.306(8) 7K00|1|A, 8AYE|1|A, 8B0X|1|A, 8CF1|1|A, 8CGI|1|A, 8CGJ|1|A, 8CGU|1|A, 8FTO|1|A(0) (0)

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
18B0X|1|ATranslating 70S ribosome in the unrotated state (P and E, tRNAs)ELECTRON MICROSCOPY1.551489
28FTO|1|AE. coli 70S ribosome with an improved MS2 tag inserted in H98ELECTRON MICROSCOPY1.851508
38AYE|1|AE. coli 70S ribosome bound to thermorubin and fMet-tRNAELECTRON MICROSCOPY1.961508
48CGU|1|AGentamicin bound to the 30S bodyELECTRON MICROSCOPY1.891039
57K00|1|AStructure of the Bacterial Ribosome at 2 Angstrom ResolutionELECTRON MICROSCOPY1.981508
68CGJ|1|AStreptomycin bound to the 30S bodyELECTRON MICROSCOPY1.791122
78CF1|1|ATetracycline bound to the 30S headELECTRON MICROSCOPY1.82481
88CGI|1|APentacycline TP038 bound to the 30S headELECTRON MICROSCOPY1.89457
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