Equivalence class NR_20.0_97435.4 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 6TPQ|1|V (rep) | 5S ribosomal RNA | pre-5S rRNA | Bacillus subtilis | Bacteria | RF00001 | RNase M5 bound to 50S ribosome with precursor 5S rRNA | Electron microscopy | 3.07 | 2020-09-30 |
| 2 | 6TNN|1|V | 5S ribosomal RNA | 5S rRNA | Bacillus subtilis | Bacteria | RF00001 | Mini-RNase III (Mini-III) bound to 50S ribosome with precursor 23S rRNA | Electron microscopy | 3.07 | 2020-09-30 |
| 3 | 6HA1|1|B | 5S ribosomal RNA | 5S ribosomal RNA | Bacillus subtilis | Bacteria | RF00001 | Cryo-EM structure of a 70S Bacillus subtilis ribosome translating the ErmD leader peptide in complex with telithromycin | Electron microscopy | 3.1 | 2018-08-29 |
| 4 | 6HA8|1|B | 5S ribosomal RNA | 5S rRNA | Bacillus subtilis | Bacteria | RF00001 | Cryo-EM structure of the ABCF protein VmlR bound to the Bacillus subtilis ribosome | Electron microscopy | 3.5 | 2018-08-29 |
| 5 | 6PPF|1|B | 5S ribosomal RNA | 5S rRNA | Bacillus subtilis | Bacteria | RF00001 | Bacterial 45SRbgA ribosomal particle class B | Electron microscopy | 3.4 | 2019-09-18 |
| 6 | 5NJT|1|V | 5S ribosomal RNA | 5S ribosomal RNA | Bacillus subtilis | Bacteria | RF00001 | Structure of the Bacillus subtilis hibernating 100S ribosome reveals the basis for 70S dimerization. | Electron microscopy | 3.8 | 2017-06-14 |
| 7 | 3J9W|1|BB | 5S ribosomal RNA | 5S ribosomal RNA | Bacillus subtilis | Bacteria | RF00001 | Cryo-EM structure of the Bacillus subtilis MifM-stalled ribosome complex | Electron microscopy | 3.9 | 2015-04-29 |
| 8 | 6HTQ|1|B | 5S ribosomal RNA | 5S ribosomal RNA | Bacillus subtilis | Bacteria | RF00001 | Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome | Electron microscopy | 4.5 | 2019-10-23 |
| 9 | 6PPK|1|B | 5S ribosomal RNA | 5S rRNA | Bacillus subtilis | Bacteria | RF00001 | RbgA+45SRbgA complex | Electron microscopy | 4.4 | 2019-09-18 |
| 10 | 3J3V|1|B | 5S ribosomal RNA | ribosome RNA 5S | Bacillus subtilis | Bacteria | RF00001 | Atomic model of the immature 50S subunit from Bacillus subtilis (state I-a) | Electron microscopy | 13.3 | 2013-06-12 |
Release history
Parents
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 6PPK|1|B | RbgA+45SRbgA complex | ELECTRON MICROSCOPY | 4.4 | 112 |
| 2 | 6PPF|1|B | Bacterial 45SRbgA ribosomal particle class B | ELECTRON MICROSCOPY | 3.4 | 112 |
| 3 | 6TNN|1|V | Mini-RNase III (Mini-III) bound to 50S ribosome with precursor 23S rRNA | ELECTRON MICROSCOPY | 3.07 | 116 |
| 4 | 6TPQ|1|V | RNase M5 bound to 50S ribosome with precursor 5S rRNA | ELECTRON MICROSCOPY | 3.07 | 123 |
| 5 | 3J9W|1|BB | Cryo-EM structure of the Bacillus subtilis MifM-stalled ribosome complex | ELECTRON MICROSCOPY | 3.9 | 112 |
| 6 | 5NJT|1|V | Structure of the Bacillus subtilis hibernating 100S ribosome reveals the basis for 70S dimerization. | ELECTRON MICROSCOPY | 3.8 | 112 |
| 7 | 6HTQ|1|B | Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome | ELECTRON MICROSCOPY | 4.5 | 112 |
| 8 | 6HA1|1|B | Cryo-EM structure of a 70S Bacillus subtilis ribosome translating the ErmD leader peptide in complex with telithromycin | ELECTRON MICROSCOPY | 3.1 | 112 |
| 9 | 6HA8|1|B | Cryo-EM structure of the ABCF protein VmlR bound to the Bacillus subtilis ribosome | ELECTRON MICROSCOPY | 3.5 | 112 |
| 10 | 3J3V|1|B | Atomic model of the immature 50S subunit from Bacillus subtilis (state I-a) | ELECTRON MICROSCOPY | 13.3 | 119 |