#IFECompound(s)RNA source organismTitleMethodResolutionDate
13BNL|1|A+ 3BNL|1|B (rep)A site of bacterial ribosomeCrystal structure of the bacterial ribosomal decoding A site in the presence of [Co(NH3)6]Cl3X-RAY DIFFRACTION2.62008-06-24
21MWL|1|A+ 1MWL|1|B5'-R(*CP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3'Crystal structure of geneticin bound to the eubacterial 16S rRNA A siteX-RAY DIFFRACTION2.42003-02-18
34F8U|1|A+ 4F8U|1|BRNA (5'-R(P*UP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3'), RNA (5'-R(P*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3')Crystal structure of the bacterial ribosomal decoding site in complex with sisomicin (C2 form)X-RAY DIFFRACTION22012-08-15
43BNP|1|A+ 3BNP|1|BA site of human mitochondrial ribosome, A chain, A site of human mitochondrial ribosome, B chainCrystal Structure of the Homo sapiens Mitochondrial Ribosomal Decoding Site (A1555G Mutant)X-RAY DIFFRACTION2.72008-06-24
52ET4|1|A+ 2ET4|1|B5'-R(*CP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3'Complex Between Neomycin B and the 16S-RRNA A-SiteX-RAY DIFFRACTION2.42005-12-13
62ET3|1|A+ 2ET3|1|B5'-R(*CP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3'Complex Between Gentamicin C1A and the 16S-RRNA A-SiteX-RAY DIFFRACTION2.82005-12-13
72ESJ|1|A+ 2ESJ|1|B5'-R(*CP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3'Complex between Lividomycin A and the 16S-Rrna A SiteX-RAY DIFFRACTION2.22005-12-20
82ET8|1|A+ 2ET8|1|B5'-R(*CP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3'Complex Between Neamine and the 16S-RRNA A-SiteX-RAY DIFFRACTION2.52005-12-13
91J7T|1|A+ 1J7T|1|B5'-R(*CP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3'Complex between Paromomycin and the 16S-rRNA A-site at 2.5 A resolutionX-RAY DIFFRACTION2.52002-05-18
102ET5|1|A+ 2ET5|1|B5'-R(*CP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3'Complex Between Ribostamycin and the 16S-RRNA A-SiteX-RAY DIFFRACTION2.22005-12-13
113BNT|1|AA site of human mitochondrial ribosomeCrystal Structure of the Homo sapiens Mitochondrial Ribosomal Decoding Site in the Presence of [Co(NH3)6]Cl3 (A1555G mutant, Br-derivative)X-RAY DIFFRACTION2.32008-06-24
122BE0|1|A+ 2BE0|1|B5'-R(*CP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3'Complex Between Paromomycin Derivative JS5-39 and the 16S-Rrna A-Site.X-RAY DIFFRACTION2.632005-12-20
131O9M|1|A+ 1O9M|1|BEUBACTERIAL A-SITEThe Complex of a novel antibiotic with the Aminoacyl Site of the Bacterial Ribosome Revealed by X-Ray Crystallography.X-RAY DIFFRACTION2.42003-03-27
142BEE|1|A+ 2BEE|1|B5'-R(*CP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3'Complex Between Paromomycin derivative JS4 and the 16S-Rrna A SiteX-RAY DIFFRACTION2.62005-12-20

Release history

Release2.02.12.22.32.42.52.62.72.82.92.102.112.122.132.142.152.162.172.182.192.202.212.222.232.242.252.262.272.282.292.302.312.322.332.342.352.362.372.382.392.402.412.422.432.442.452.462.472.482.492.502.512.522.532.542.552.562.572.582.592.602.612.622.632.642.652.662.672.682.692.702.712.722.732.742.752.762.772.782.792.802.812.822.832.842.852.862.872.882.892.902.912.92
Date2014-12-052014-12-122014-12-192014-12-262015-01-022015-01-092015-01-162015-01-232015-01-302015-02-062015-02-132015-02-202015-02-272015-03-062015-03-132015-03-202015-03-272015-04-032015-04-102015-04-172015-04-242015-05-012015-05-082015-05-152015-05-222015-05-292015-06-052015-06-122015-06-192015-06-262015-07-032015-07-102015-07-172015-07-242015-07-312015-08-072015-08-142015-08-212015-08-282015-09-042015-09-112015-09-182015-09-252015-10-022015-10-092015-10-162015-10-232015-10-302015-11-062015-11-132015-11-202015-11-272015-12-042015-12-112015-12-182015-12-252016-01-012016-01-082016-01-152016-01-222016-01-292016-02-052016-02-122016-02-192016-02-262016-03-042016-03-112016-03-182016-03-252016-04-012016-04-082016-04-152016-04-222016-04-292016-05-062016-05-132016-05-202016-05-272016-06-032016-06-102016-06-172016-06-242016-07-012016-07-082016-07-152016-07-222016-07-292016-08-052016-08-122016-08-192016-08-262016-09-022016-09-09

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_3.0_27927.1NR_3.0_21191.12.93(1) 3BNT|1|A(13) 1J7T|1|A+1J7T|1|B, 2BEE|1|A+2BEE|1|B, 2ET5|1|A+2ET5|1|B, 4F8U|1|A+4F8U|1|B, 2BE0|1|A+2BE0|1|B, 2ET4|1|A+2ET4|1|B, 3BNP|1|A+3BNP|1|B, 1O9M|1|A+1O9M|1|B, 2ET3|1|A+2ET3|1|B, 3BNL|1|A+3BNL|1|B, 1MWL|1|A+1MWL|1|B, 2ESJ|1|A+2ESJ|1|B, 2ET8|1|A+2ET8|1|B(0)
NR_3.0_27927.1NR_3.0_46403.12.93(1) 3BNP|1|A+3BNP|1|B(13) 3BNL|1|A+3BNL|1|B, 1MWL|1|A+1MWL|1|B, 2ESJ|1|A+2ESJ|1|B, 2ET8|1|A+2ET8|1|B, 1J7T|1|A+1J7T|1|B, 2BEE|1|A+2BEE|1|B, 2ET5|1|A+2ET5|1|B, 4F8U|1|A+4F8U|1|B, 2BE0|1|A+2BE0|1|B, 2ET4|1|A+2ET4|1|B, 3BNT|1|A, 1O9M|1|A+1O9M|1|B, 2ET3|1|A+2ET3|1|B(4) 3BNN|1|C+3BNN|1|D, 3BNO|1|A+3BNO|1|B, 3BNO|1|C+3BNO|1|D, 3BNN|1|A+3BNN|1|B
NR_3.0_27927.1NR_3.0_52295.12.93(2) 1O9M|1|A+1O9M|1|B, 2ET8|1|A+2ET8|1|B(12) 2BEE|1|A+2BEE|1|B, 2ET5|1|A+2ET5|1|B, 4F8U|1|A+4F8U|1|B, 2BE0|1|A+2BE0|1|B, 2ET4|1|A+2ET4|1|B, 3BNT|1|A, 1MWL|1|A+1MWL|1|B, 2ET3|1|A+2ET3|1|B, 3BNP|1|A+3BNP|1|B, 1J7T|1|A+1J7T|1|B, 2ESJ|1|A+2ESJ|1|B, 3BNL|1|A+3BNL|1|B(1) 2F4U|1|A+2F4U|1|B
NR_3.0_27927.1NR_3.0_97151.12.93(10) 2ET4|1|A+2ET4|1|B, 2ET3|1|A+2ET3|1|B, 2ET5|1|A+2ET5|1|B, 4F8U|1|A+4F8U|1|B, 3BNL|1|A+3BNL|1|B, 2BEE|1|A+2BEE|1|B, 1MWL|1|A+1MWL|1|B, 2BE0|1|A+2BE0|1|B, 1J7T|1|A+1J7T|1|B, 2ESJ|1|A+2ESJ|1|B(4) 3BNT|1|A, 2ET8|1|A+2ET8|1|B, 3BNP|1|A+3BNP|1|B, 1O9M|1|A+1O9M|1|B(20) 4GPY|1|A+4GPY|1|B, 4P3S|1|B+4P3S|1|A, 4K32|1|A+4K32|1|B, 4PDQ|1|A+4PDQ|1|B, 4P20|1|A+4P20|1|B, 4WCP|1|A+4WCP|1|B+4WCP|1|C, 4WCQ|1|A+4WCQ|1|B, 5BWS|1|A+5BWS|1|B, 5BWS|1|C+5BWS|1|D, 1LC4|1|A+1LC4|1|B, 1YRJ|1|A+1YRJ|1|B, 2ESI|1|A+2ESI|1|B, 2F4T|1|B+2F4T|1|A, 2PWT|1|A+2PWT|1|B, 3S4P|1|A+3S4P|1|B, 3TD1|1|B+3TD1|1|A, 3WRU|1|A+3WRU|1|B, 4GPX|1|A+4GPX|1|B, 4F8V|1|A+4F8V|1|B, 4GPW|1|A+4GPW|1|B

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength