NR_3.0_35054.1

Members (6)
History
Heat map

#	IFE	Standardized name	Molecule	Organism	Source	Rfam	Title	Method	Res. Å	Date
1	4FAU\|1\|A (rep)	Group II catalytic intron D1-D4-1	Group IIC intron	Oceanobacillus iheyensis	Bacteria	RF01998	Structure of Oceanobacillus iheyensis group II intron in the presence of Li+, Mg2+ and 5'-exon	X-ray diffraction	2.87	2012-11-14
2	4FAW\|1\|A	Group II catalytic intron D1-D4-1	Group IIC intron, 5'-R(AUPUPUPAPUPUPA)-3'	Oceanobacillus iheyensis	Bacteria	RF01998	Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Mg2+ and a hydrolyzed oligonucleotide fragment	X-ray diffraction	2.7	2012-11-14
3	3G78\|1\|A	Group II catalytic intron D1-D4-1	Group II intron, Ligated EXON product	Oceanobacillus iheyensis	Bacteria	RF01998	Insight into group II intron catalysis from revised crystal structure	X-ray diffraction	2.8	2010-02-16
4	4E8Q\|1\|A	Group II catalytic intron D1-D4-1	Group IIC intron	Oceanobacillus iheyensis	Bacteria	RF01998	Structure of Oceanobacillus iheyensis group II intron in a ligand-free state in the presence of Tl+ and Mg2+	X-ray diffraction	2.84	2012-11-14
5	4E8N\|1\|A	Group II catalytic intron D1-D4-1	Group IIC intron	Oceanobacillus iheyensis	Bacteria	RF01998	Structure of Oceanobacillus iheyensis group II intron in a ligand-free state in the presence of NH4+ and Mg2+	X-ray diffraction	2.96	2012-11-14
6	4FAR\|1\|A	Group II catalytic intron D1-D4-1	Group IIC intron	Oceanobacillus iheyensis	Bacteria	RF01998	Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Mg2+ and 5'-exon	X-ray diffraction	2.86	2012-11-14

Release history

Release	2.0	2.1	2.2	2.3	2.4	2.5	2.6	2.7	2.8	2.9	2.10	2.11	2.12	2.13	2.14	2.15	2.16	2.17	2.18	2.19	2.20	2.21	2.22	2.23	2.24	2.25	2.26	2.27	2.28	2.29	2.30	2.31	2.32	2.33	2.34	2.35	2.36	2.37	2.38	2.39	2.40	2.41	2.42	2.43	2.44
Date	2014-12-05	2014-12-12	2014-12-19	2014-12-26	2015-01-02	2015-01-09	2015-01-16	2015-01-23	2015-01-30	2015-02-06	2015-02-13	2015-02-20	2015-02-27	2015-03-06	2015-03-13	2015-03-20	2015-03-27	2015-04-03	2015-04-10	2015-04-17	2015-04-24	2015-05-01	2015-05-08	2015-05-15	2015-05-22	2015-05-29	2015-06-05	2015-06-12	2015-06-19	2015-06-26	2015-07-03	2015-07-10	2015-07-17	2015-07-24	2015-07-31	2015-08-07	2015-08-14	2015-08-21	2015-08-28	2015-09-04	2015-09-11	2015-09-18	2015-09-25	2015-10-02	2015-10-09

Parents

This class	Parent classes	Release id	Intersection	Added to this class	Only in parent

Children

This class	Descendant classes	Release id	Intersection	Only in this class	Added to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).

#S	PDB	Title	Method	Resolution	Length
1	4FAW\|1\|A	Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Mg2+ and a hydrolyzed oligonucleotide fragment	X-RAY DIFFRACTION	2.7	390
2	4FAU\|1\|A	Structure of Oceanobacillus iheyensis group II intron in the presence of Li+, Mg2+ and 5'-exon	X-RAY DIFFRACTION	2.87	395
3	4FAR\|1\|A	Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Mg2+ and 5'-exon	X-RAY DIFFRACTION	2.86	390
4	4E8Q\|1\|A	Structure of Oceanobacillus iheyensis group II intron in a ligand-free state in the presence of Tl+ and Mg2+	X-RAY DIFFRACTION	2.84	393
5	4E8N\|1\|A	Structure of Oceanobacillus iheyensis group II intron in a ligand-free state in the presence of NH4+ and Mg2+	X-RAY DIFFRACTION	2.96	393
6	3G78\|1\|A	Insight into group II intron catalysis from revised crystal structure	X-RAY DIFFRACTION	2.8	389

Equivalence class NR_3.0_35054.1 Obsolete

Release history

Parents

Children